Tumor Copy Number Data Deconvolution Integrating Bulk and Single-cell Sequencing Data. - Haoyun Lei; Bochuan Lyu; E. Michael Gertz; Alejandro A. Schäffer; Russell Schwartz (ICCABS, 2018)

Phylogenies Derived from Matched Transcriptome Reveal the Evolution of Cell Populations and Temporal Order of Perturbed Pathways in Breast Cancer Brain Metastases. - Yifeng Tao; Haoyun Lei; Adrian V. Lee; Jian Ma 004; Russell Schwartz (ISMCO, 2019)

Latent Sparse Discriminative Learning for Face Image Set Classification. - Yuan Sun 016; Zhenwen Ren; Chao Yang; Haoyun Lei (NCAA, 2020)

Robust and accurate deconvolution of tumor populations uncovers evolutionary mechanisms of breast cancer metastasis. - Yifeng Tao; Haoyun Lei; Xuecong Fu; Adrian V. Lee; Jian Ma 004; Russell Schwartz (Bioinform., 2020)

Tumor Copy Number Deconvolution Integrating Bulk and Single-Cell Sequencing Data. - Haoyun Lei; Bochuan Lyu; E. Michael Gertz; Alejandro A. Schäffer; Xulian Shi; Kui Wu 005; Guibo Li; Liqin Xu; Yong Hou; Michael Dean; Russell Schwartz (J. Comput. Biol., 2020)

Tumor heterogeneity assessed by sequencing and fluorescence in situ hybridization (FISH) data. - Haoyun Lei; E. Michael Gertz; Alejandro A. Schäffer; Xuecong Fu; Yifeng Tao; Kerstin Heselmeyer-Haddad; Irianna Torres; Guibo Li; Liqin Xu; Yong Hou; Kui Wu 005; Xulian Shi; et al. (Bioinform., 2021)

Multiple kernel clustering with pure graph learning scheme. - Xingfeng Li 004; Zhenwen Ren; Haoyun Lei; Yuqing Huang; Quansen Sun (Neurocomputing, 2021)

Simultaneous learning coefficient matrix and affinity graph for multiple kernel clustering. - Zhenwen Ren; Haoyun Lei; Quansen Sun; Chao Yang (Inf. Sci., 2021)

Joint Clustering of Single-Cell Sequencing and Fluorescence In Situ Hybridization Data for Reconstructing Clonal Heterogeneity in Cancers. - Xuecong Fu; Haoyun Lei; Yifeng Tao; Kerstin Heselmeyer-Haddad; Irianna Torres; Michael Dean; Thomas Ried; Russell Schwartz (J. Comput. Biol., 2021)

Reconstructing tumor clonal lineage trees incorporating single-nucleotide variants, copy number alterations and structural variations. - Xuecong Fu; Haoyun Lei; Yifeng Tao; Russell Schwartz (Bioinform., 2022)

Semi-deconvolution of bulk and single-cell RNA-seq data with application to metastatic progression in breast cancer. - Haoyun Lei; Xiaoyan A. Guo; Yifeng Tao; Kai Ding; Xuecong Fu; Steffi Oesterreich; Adrian V. Lee; Russell Schwartz (Bioinform., 2022)

A Clonal Evolution Simulator for Planning Somatic Evolution Studies. - Arjun Srivatsa; Haoyun Lei; Russell Schwartz (J. Comput. Biol., 2023)