AxML: A Fast Program for Sequential and Parallel Phylogenetic Tree Calculations Based on the Maximum Likelihood Method. - Alexandros Stamatakis; Thomas Ludwig 002; Harald Meier; Marty J. Wolf (CSB, 2002)

Accelerating parallel maximum likelihood-based phylogenetic tree calculations using subtree equality vectors. - Alexandros Stamatakis; Thomas Ludwig 002; Harald Meier; Marty J. Wolf (SC, 2002)

Accurate Method for Fast Design of Diagnostic Oligonucleotide Probe Sets for DNA Microarrays. - Andreas Krause 001; Markus Kräutner; Harald Meier (IPDPS, 2003)

DAxML: A Program for Distributed Computation of Phylogenetic Trees Based on Load Managed CORBA. - Alexandros Stamatakis; Markus Lindermeier; Michael Ott 001; Thomas Ludwig 002; Harald Meier (PaCT, 2003)

Parallel Inference of a 10.000-Taxon Phylogeny with Maximum Likelihood. - Alexandros Stamatakis; Thomas Ludwig 002; Harald Meier (Euro-Par, 2004)

New Fast and Accurate Heuristics for Inference of Large Phylogenetic Trees. - Alexandros Stamatakis; Harald Meier; Thomas Ludwig 002 (IPDPS, 2004)

A fast program for maximum likelihood-based inference of large phylogenetic trees. - Alexandros Stamatakis; Thomas Ludwig 002; Harald Meier (SAC, 2004)

Development and implementation of a parallel algorithm for the fast design of oligonucleotide probe sets for diagnostic DNA microarrays. - Harald Meier; Andreas Krause 001; Markus Kräutner; Arndt Bode (Concurr. Pract. Exp., 2004)

The AxML program family for maximum likelihood-based phylogenetic tree inference. - Alexandros Stamatakis; Thomas Ludwig 002; Harald Meier (Concurr. Pract. Exp., 2004)

RAxML-III: a fast program for maximum likelihood-based inference of large phylogenetic trees. - Alexandros Stamatakis; Thomas Ludwig 002; Harald Meier (Bioinform., 2005)

Graphical representation of ribosomal RNA probe accessibility data using ARB software package. - Yadhu Kumar; Ralf Westram; Sebastian Behrens; Bernhard Fuchs; Frank Oliver Glöckner; Rudolf Amann; Harald Meier; Wolfgang Ludwig (BMC Bioinform., 2005)

RAxML-II: a program for sequential, parallel and distributed inference of large phylogenetic trees. - Alexandros Stamatakis; Thomas Ludwig 002; Harald Meier (Concurr. Comput. Pract. Exp., 2005)

DRAxML at home: a distributed program for computation of large phylogenetic trees. - Alexandros Stamatakis; Markus Lindermeier; Michael Ott 001; Thomas Ludwig 002; Harald Meier (Future Gener. Comput. Syst., 2005)

Evaluation of sequence alignments and oligonucleotide probes with respect to three-dimensional structure of ribosomal RNA using ARB software package. - Yadhu Kumar; Ralf Westram; Peter Kipfer; Harald Meier; Wolfgang Ludwig (BMC Bioinform., 2006)

PhylArray: phylogenetic probe design algorithm for microarray. - Cécile Militon; Sébastien Rimour; Mohieddine Missaoui; Corinne Biderre; Vincent Barra; David R. C. Hill; Anne Moné; Geneviève Gagne; Harald Meier; Eric Peyretaillade; Pierre Peyret (Bioinform., 2007)

Distributed Stream Processing with DUP. - Kai Christian Bader; Tilo Eißler; Nathan S. Evans; Chris GauthierDickey; Christian Grothoff; Krista Grothoff; Jeff Keene; Harald Meier; Craig Ritzdorf; Matthew J. Rutherford (NPC, 2010)

Comprehensive and relaxed search for oligonucleotide signatures in hierarchically clustered sequence datasets. - Kai Christian Bader; Christian Grothoff; Harald Meier (Bioinform., 2011)

PTPan - overcoming memory limitations in oligonucleotide string matching for primer/probe design. - Tilo Eißler; Christopher P. Hodges; Harald Meier (Bioinform., 2011)

Tutorial: Introduction to Social Media Network Analysis with NodeXL. - Marc A. Smith; Harald Meier (ASONAM, 2016)

NodeXL - A few Clicks to Network Insights (Software Abstract). - Harald Meier; Arber Ceni (GD, 2024)