Graph Spectral Approach for Identifying Protein Domains. - Hari Krishna Yalamanchili; Nita Parekh (BICoB, 2009)

Identifying Structural Repeats in Proteins using Graph Centrality Measures. - Hari Krishna Yalamanchili; Ruchi Jain; Nita Parekh (NaBIC, 2009)

Correlated evolution of transcription factors and their binding sites. - Shu Yang 009; Hari Krishna Yalamanchili; Xinran Li; Kwok-Ming Yao; Pak Chung Sham; Michael Q. Zhang; Junwen Wang (Bioinform., 2011)

A novel neural response algorithm for protein function prediction. - Hari Krishna Yalamanchili; Quan-Wu Xiao; Junwen Wang (BMC Syst. Biol., 2012)

DDGni: Dynamic delay gene-network inference from high-temporal data using gapped local alignment. - Hari Krishna Yalamanchili; Bin Yan; Mulin Jun Li; Jing Qin 004; Zhongying Zhao 002; Francis Y. L. Chin; Junwen Wang (Bioinform., 2014)

The Current Status and Challenges in Computational Analysis of Genomic Big Data. - Yiming Qin; Hari Krishna Yalamanchili; Jing Qin 004; Bin Yan; Junwen Wang (Big Data Res., 2015)

Decoding TDP-43 Dependent Cryptic Splicing in Amyotrophic Lateral Sclerosis and Identifying Novel Disease-causing Genes. - Hari Krishna Yalamanchili; Hyun-Hwan Jeong; Zhandong Liu (BCB, 2018)

An ultra-fast and scalable quantification pipeline for transposable elements from next generation sequencing data. - Hyun-Hwan Jeong; Hari Krishna Yalamanchili; Caiwei Guo; Joshua M. Shulman; Zhandong Liu (PSB, 2018)

C/PAS-BERT: A Novel Attention-Based Deep Learning Approach to Identify and Characterize Cleavage and Polyadenylation Sites. - Venkata S. Jonnakuti; Zhandong Liu; Hari Krishna Yalamanchili (AMIA, 2022)