Discovering Novel Biological Traits From Images Using Phylogeny-Guided Neural Networks. - Mohannad Elhamod; Mridul Khurana; Harish Babu Manogaran; Josef C. Uyeda; Meghan A. Balk; Wasila M. Dahdul; Yasin Bakis; Henry L. Bart Jr.; Paula M. Mabee; Hilmar Lapp; James P. Balhoff; Caleb Charpentier; et al. (KDD, 2023)

VLM4Bio: A Benchmark Dataset to Evaluate Pretrained Vision-Language Models for Trait Discovery from Biological Images. - M. Maruf; Arka Daw; Kazi Sajeed Mehrab; Harish Babu Manogaran; Abhilash Neog; Medha Sawhney; Mridul Khurana; James P. Balhoff; Yasin Bakis; Bahadir Altintas; Matthew J. Thompson; Elizabeth G. Campolongo; et al. (NeurIPS, 2024)

Fish-Vista: A Multi-Purpose Dataset for Understanding & Identification of Traits from Images. - Kazi Sajeed Mehrab; M. Maruf; Arka Daw; Harish Babu Manogaran; Abhilash Neog; Mridul Khurana; Bahadir Altintas; Yasin Bakis; Elizabeth G. Campolongo; Matthew J. Thompson; Xiaojun Wang; Hilmar Lapp; et al. (CoRR, 2024)

What Do You See in Common? Learning Hierarchical Prototypes over Tree-of-Life to Discover Evolutionary Traits. - Harish Babu Manogaran; M. Maruf; Arka Daw; Kazi Sajeed Mehrab; Caleb Charpentier; Josef C. Uyeda; Wasila M. Dahdul; Matthew J. Thompson; Elizabeth G. Campolongo; Kaiya Provost; Paula M. Mabee; Hilmar Lapp; et al. (CoRR, 2024)

Fish-Vista: A Multi-Purpose Dataset for Understanding & Identification of Traits from Images. - Kazi Sajeed Mehrab; M. Maruf; Arka Daw; Abhilash Neog; Harish Babu Manogaran; Mridul Khurana; Zhenyang Feng; Bahadir Altintas; Yasin Bakis; Elizabeth G. Campolongo; Matthew J. Thompson; Xiaojun Wang; et al. (CVPR, 2025)

What Do You See in Common? Learning Hierarchical Prototypes over Tree-of-Life to Discover Evolutionary Traits. - Harish Babu Manogaran; M. Maruf; Arka Daw; Kazi Sajeed Mehrab; Caleb Patrick Charpentier; Josef C. Uyeda; Wasila M. Dahdul; Matthew J. Thompson; Elizabeth G. Campolongo; Kaiya L. Provost; Wei-Lun Chao; Tanya Y. Berger-Wolf; et al. (ICLR, 2025)