Quality Improvement Dashboard to Monitor Oral Manifestations of Dysglycemic Patients. - Harshad Hegde; Alok Sagar Panny; Rajesh H. Koralkar; Amit Acharya (AMIA, 2017)

KG-Microbe: A Reference Knowledge-Graph and Platform for Harmonized Microbial Information. - Marcin P. Joachimiak; Harshad Hegde; William D. Duncan; Justin T. Reese; Luca Cappelletti; Anne E. Thessen; Christopher J. Mungall (ICBO, 2021)

The Linked Data Modeling Language (LinkML): A General-Purpose Data Modeling Framework Grounded in Machine-Readable Semantics. - Sierra A. T. Moxon; Harold Solbrig; Deepak R. Unni; Dazhi Jiao; Richard M. Bruskiewich; James P. Balhoff; Gaurav Vaidya; William D. Duncan; Harshad Hegde; Mark A. Miller; Matthew H. Brush; Nomi L. Harris; et al. (ICBO, 2021)

A simple standard for ontological mappings 2022: updates of data model and outlook. - Nicolas Matentzoglu; Joe E. Flack; John B. Graybeal; Nomi L. Harris; Harshad B. Hegde; Charles Tapley Hoyt; Hyeongsik Kim 001; Sabrina Toro; Nicole A. Vasilevsky; Christopher J. Mungall (OM@ISWC, 2022)

A Simple Standard for Sharing Ontological Mappings (SSSOM). - Nicolas Matentzoglu; James P. Balhoff; Susan M. Bello; Chris Bizon; Matthew H. Brush; Tiffany J. Callahan; Christopher G. Chute; William D. Duncan; Chris T. A. Evelo; Davera Gabriel; John B. Graybeal; Alasdair J. G. Gray; et al. (Database J. Biol. Databases Curation, 2022)

A simple standard for ontological mappings 2023: updates on data model, collaborations and tooling. - Nicolas Matentzoglu; Ian Braun; Anita R. Caron; Damien Goutte-Gattat; Benjamin M. Gyori; Nomi L. Harris; Emily Hartley; Harshad B. Hegde; Sven Hertling; Charles Tapley Hoyt; Hyeongsik Kim 001; Huanyu Li 001; et al. (OM@ISWC, 2023)

KG-Hub - Building and Exchanging Biological Knowledge Graphs. - J. Harry Caufield; Tim E. Putman; Kevin Schaper; Deepak R. Unni; Harshad Hegde; Tiffany J. Callahan; Luca Cappelletti; Sierra A. T. Moxon; Vida Ravanmehr; Seth Carbon; Lauren E. Chan; Katherina Cortes; et al. (CoRR, 2023)

MapperGPT: Large Language Models for Linking and Mapping Entities. - Nicolas Matentzoglu; J. Harry Caufield; Harshad B. Hegde; Justin T. Reese; Sierra A. T. Moxon; Hyeongsik Kim 001; Nomi L. Harris; Melissa A. Haendel; Christopher J. Mungall (CoRR, 2023)

Using knowledge graphs to infer gene expression in plants. - Anne E. Thessen; Laurel Cooper; Tyson L. Swetnam; Harshad Hegde; Justin T. Reese; Justin Elser; Pankaj Jaiswal (Frontiers Artif. Intell., 2023)

CurateGPT: A flexible language-model assisted biocuration tool. - J. Harry Caufield; Carlo Kroll; Shawn T. O'Neil; Justin T. Reese; Marcin P. Joachimiak; Harshad Hegde; Nomi L. Harris; Madan Krishnamurthy; James A. McLaughlin; Damian Smedley; Melissa A. Haendel; Peter N. Robinson; et al. (CoRR, 2024)

Predicting nutrition and environmental factors associated with female reproductive disorders using a knowledge graph and random forests. - Lauren E. Chan; Elena Casiraghi; Justin T. Reese; Quaker E. Harmon; Kevin Schaper; Harshad Hegde; Giorgio Valentini; Charles Schmitt; Alison A. Motsinger-Reif; Janet E. Hall; Christopher J. Mungall; Peter N. Robinson; et al. (Int. J. Medical Informatics, 2024)

Automated annotation of scientific texts for ML-based keyphrase extraction and validation. - Oluwamayowa O. Amusat; Harshad Hegde; Christopher J. Mungall; Anna Giannakou; Neil P. Byers; Dan Gunter; Kjiersten Fagnan; Lavanya Ramakrishnan (Database J. Biol. Databases Curation, 2024)

Structured Prompt Interrogation and Recursive Extraction of Semantics (SPIRES): a method for populating knowledge bases using zero-shot learning. - J. Harry Caufield; Harshad Hegde; Vincent Emonet; Nomi L. Harris; Marcin P. Joachimiak; Nicolas Matentzoglu; Hyeongsik Kim 001; Sierra A. T. Moxon; Justin T. Reese; Melissa A. Haendel; Peter N. Robinson; Christopher J. Mungall (Bioinform., 2024)

A change language for ontologies and knowledge graphs. - Harshad Hegde; Jennifer Vendetti; Damien Goutte-Gattat; J. Harry Caufield; John B. Graybeal; Nomi L. Harris; Naouel Karam; Christian Kindermann; Nicolas Matentzoglu; James A. Overton; Mark A. Musen; Christopher J. Mungall (Database J. Biol. Databases Curation, 2025)