Sun position estimation and tracking for virtual object placement in time-lapse videos. - Hasan Balci; Ugur Güdükbay (Signal Image Video Process., 2017)

Newt: a comprehensive web-based tool for viewing, constructing and analyzing biological maps. - Hasan Balci; Metin Can Siper; Nasim Saleh; Ilkin Safarli; Ludovic Roy; Merve Kilicarslan; Rumeysa Ozaydin; Alexander Mazein; Charles Auffray; Özgün Babur; Emek Demir; Ugur Dogrusoz (Bioinform., 2021)

CoSEP: A compound spring embedder layout algorithm with support for ports. - Alihan Okka; Ugur Dogrusoz; Hasan Balci (Inf. Vis., 2021)

fCoSE: A Fast Compound Graph Layout Algorithm with Constraint Support. - Hasan Balci; Ugur Dogrusoz (IEEE Trans. Vis. Comput. Graph., 2022)

Fast compound graph layout with constraint support (Kısıt destekli hızlı bileşik çizge yerleştirme) - Hasan Balci (2022)

SyBLaRS: A web service for laying out, rendering and mining biological maps in SBGN, SBML and more. - Hasan Balci; Ugur Dogrusoz; Yusuf Ziya Ozgul; Perman Atayev (PLoS Comput. Biol., 2022)

BioDataFuse: Enhancing data interoperability through modular queries and knowledge graph construction. - Tooba Abbassi-Daloii; Yojana Gadiya; Ammar Ammar; Egon L. Willighagen; Ana Claudia Sima; Hasan Balci (SWAT4HCLS, 2024)

User-Guided Force-Directed Graph Layout. - Hasan Balci; Augustin Luna (CoRR, 2025)