A joint source/channel coder with block constraints. - Hasan H. Otu; Khalid Sayood (IEEE Trans. Commun., 1999)

Joint source/channel coding for variable length codes. - Khalid Sayood; Hasan H. Otu; Nejat Demir (IEEE Trans. Commun., 2000)

A divide-and-conquer approach to fragment assembly. - Hasan H. Otu; Khalid Sayood (Bioinform., 2003)

A new sequence distance measure for phylogenetic tree construction. - Hasan H. Otu; Khalid Sayood (Bioinform., 2003)

Grammar-based distance in progressive multiple sequence alignment. - David J. Russell; Hasan H. Otu; Khalid Sayood (BMC Bioinform., 2008)

Prediction of Peptides Binding to MHC Class I Alleles by Partial Periodic Pattern Mining. - Cem Meydan; Osman Ugur Sezerman; Hasan H. Otu (IJCBS, 2009)

Clustering of protein families into functional subtypes using Relative Complexity Measure with reduced amino acid alphabets. - Aydin Albayrak; Hasan H. Otu; Osman Ugur Sezerman (BMC Bioinform., 2010)

Pathway analysis of high-throughput biological data within a Bayesian network framework. - Senol Isci; Cengizhan Ozturk; Jon Jones; Hasan H. Otu (Bioinform., 2011)

Testing robustness of relative complexity measure method constructing robust phylogenetic trees for Galanthus L. Using the relative complexity measure. - Yasin Bakis; Hasan H. Otu; Nivart Taçi; Cem Meydan; Nee Bilgin; Sirri Yüzbaiolu; Osman Ugur Sezerman (BMC Bioinform., 2013)

Prediction of peptides binding to MHC class I and II alleles by temporal motif mining. - Cem Meydan; Hasan H. Otu; Osman Ugur Sezerman (BMC Bioinform., 2013)

Bayesian network prior: network analysis of biological data using external knowledge. - Senol Isci; Haluk Dogan; Cengizhan Ozturk; Hasan H. Otu (Bioinform., 2014)

Comparative analysis of human and mouse CpG islands using dbCGI. - Dicle Yalcin; Hasan H. Otu (EIT, 2017)

FQStat: a parallel architecture for very high-speed assessment of sequencing quality metrics. - Sree K. Chanumolu; Mustafa Albahrani; Hasan H. Otu (BMC Bioinform., 2019)