Discriminative Remote Homology Detection Using Maximal Unique Sequence Matches. - Hasan Ogul; Ü. Erkan Mumcuoglu (IDA, 2005)

Protein Solvent Accessibility Prediction Using Support Vector Machines and Sequence Conservations. - Hasan Ogul; Ü. Erkan Mumcuoglu (TAINN, 2005)

SVM-based detection of distant protein structural relationships using pairwise probabilistic suffix trees. - Hasan Ogul; Ü. Erkan Mumcuoglu (Comput. Biol. Chem., 2006)

Computational representation of protein sequences for homology detection and classification ; Protein dizilimlerinin homoloji sezimi ve sınıflandırma amaçlı bilişimsel gösterimi. - Hasan Ogul (2006)

Erratum to "A discriminative method for remote homology detection based on n-peptide compositions with reduced amino acid alphabets" [BioSystems 87 (2007) 75-81]. - Hasan Ogul; Ü. Erkan Mumcuoglu (Biosyst., 2007)

A discriminative method for remote homology detection based on n-peptide compositions with reduced amino acid alphabets. - Hasan Ogul; Ü. Erkan Mumcuoglu (Biosyst., 2007)

Subcellular Localization Prediction with New Protein Encoding Schemes. - Hasan Ogul; Ü. Erkan Mumcuoglu (IEEE ACM Trans. Comput. Biol. Bioinform., 2007)

Prediction of Disulfide Connectivity Patterns from Protein Sequence. - Hasan Ogul (BCBGC, 2008)

A Data Fusion Approach in Protein Homology Detection. - Aydin Can Polatkan; Hasan Ogul; Hayri Sever (BIOTECHNO, 2008)

Variable context Markov chains for HIV protease cleavage site prediction. - Hasan Ogul (Biosyst., 2009)

A Probabilistic Method for Prediction of microRNA-target Interactions. - Hasan Ogul; Sinan U. Umu; Y. Yener Tuncel; Mahinur S. Akkaya (IJCCI (NCTA), 2011)

Two-way collaborative filtering on semantically enhanced movie ratings. - Hasan Ogul; Emrah Ekmekciler (ITI, 2012)

Integrating MicroRNA and mRNA Expression Data for Cancer Classification. - Hasan Ogul; Onur Altindag (ICPRAM, 2013)

Content-Based Search on Time-Series Microarray Databases. - Ahmet Hayran; Hasan Ogul; Esma Ozkoc (DEXA Workshops, 2014)

Detection of microRNA clusters associateci with prostate cancer. - Ismail Haberal; Hasan Ogul (SIU, 2014)

Inferring similarity between time-series microarrays: A content-based approach. - Duygu Dede Sener; Hasan Ogul (CYBCONF, 2015)

Predicting Metal-Binding Sites of Protein Residues. - Serkan Küçükbay; Hasan Ogul (FedCSIS (Position Papers), 2015)

Comparison of similarity metrics in microarray experiment retrieval. - Koray Açici; Hasan Ogul (SIU, 2015)

Author recognition from lyrics. - Basar Kirmaci; Hasan Ogul (SIU, 2015)

Unsupervised Rib Delineation in Chest Radiographs by an Integrative Approach. - B. Buket Ogul; Emre Sümer; Hasan Ogul (VISAPP (1), 2015)

Retrieving relevant experiments: The case of microRNA microarrays. - Koray Açici; Yunus Kasim Terzi; Hasan Ogul (Biosyst., 2015)

miSEA: microRNA set enrichment analysis. - M. Erdem Çorapçioglu; Hasan Ogul (Biosyst., 2015)

Sequence-based MicroRNA Clustering. - Kübra Narci; Hasan Ogul; Mahinur S. Akkaya (BIOINFORMATICS, 2016)

Integrating Features for Accelerometer-based Activity Recognition. - Çagatay Berke Erdas; Isil Atasoy; Koray Açici; Hasan Ogul (EUSPN/ICTH, 2016)

Lyrics Mining for Music Meta-Data Estimation. - Hasan Ogul; Basar Kirmaci (AIAI, 2016)

Sequence analysis to predict microRNA chemotherapy resistance. - Muratcan Igdeli; Atif Yilmaz; Hasan Ogul (IEEE Conf. on Intelligent Systems, 2016)

Texture of Activities: Exploiting Local Binary Patterns for Accelerometer Data Analysis. - Tunç Asuroglu; Koray Açici; Çagatay Berke Erdas; Hasan Ogul (SITIS, 2016)

Context-sensitive model learning for lung nodule detection. - B. Buket Ogul; Hasan Ogul; Emre Sümer (SIU, 2016)

Eliminating rib shadows in chest radiographic images providing diagnostic assistance. - Hasan Ogul; B. Buket Ogul; A. Muhtesem Agildere; Tuncay Bayrak; Emre Sümer (Comput. Methods Programs Biomed., 2016)

Exploiting Active MicroRNA Interactions for Diagnosis from Expression Profiling Experiments. - M. Erdem Çorapçioglu; Hasan Ogul (CBMS, 2017)

A Random Forest Method to Detect Parkinson's Disease via Gait Analysis. - Koray Açici; Çagatay Berke Erdas; Tunç Asuroglu; Münire Kilinç Toprak; Hamit Erdem; Hasan Ogul (EANN, 2017)

Information retrieval in metal music sub-genres. - Koray Açici; Tunç Asuroglu; Hasan Ogul (SIU, 2017)

A web application for content based geographic image retrieval. - Naime Celik; Hasan Ogul (SIU, 2017)

A medical decision support system proposal supported by genomic analysis. - M. Erdem Çorapçioglu; Hasan Ogul (SIU, 2017)

ALoT: A Time-Series Similarity Measure Based on Alignment of Textures. - Hasan Ogul (IDEAL (1), 2018)

HANDY: A Benchmark Dataset for Context-Awareness via Wrist-Worn Motion Sensors. - Koray Açici; Çagatay Berke Erdas; Tunç Asuroglu; Hasan Ogul (Data, 2018)

A Content-Based Retrieval Framework for Whole Metagenome Sequencing Samples. - Duygu Dede Sener; Daniele Santoni; Giovanni Felici; Hasan Ogul (J. Integr. Bioinform., 2018)

Infection Diagnosis using Biomedical Signals in Small Data Scenarios. - Alejandro Baldominos; Hasan Ogul; Ricardo Colomo-Palacios (CBMS, 2019)

On Computer-Aided Prognosis of Septic Shock from Vital Signs. - Hasan Ogul; Alejandro Baldominos; Tunç Asuroglu; Ricardo Colomo-Palacios (CBMS, 2019)

mirLSTM: A Deep Sequential Approach to MicroRNA Target Binding Site Prediction. - Ahmet Paker; Hasan Ogul (DEXA Workshops, 2019)

T4SS Effector Protein Prediction with Deep Learning. - Koray Açici; Tunç Asuroglu; Çagatay Berke Erdas; Hasan Ogul (Data, 2019)

Objective Pain Assessment Using Vital Signs. - Burak Erdogan; Hasan Ogul (ANT/EDI40, 2020)

Content-Based Search in Lecture Video: A Systematic Literature Review. - Dipesh Chand; Hasan Ogul (ICICT, 2020)

Computer-Aided Breast Cancer Diagnosis from Thermal Images Using Transfer Learning. - Çagri Cabioglu; Hasan Ogul (IWBBIO, 2020)

Predicting Infections Using Computational Intelligence - A Systematic Review. - Alejandro Baldominos; Adráan Puello; Hasan Ogul; Tunç Asuroglu; Ricardo Colomo-Palacios (IEEE Access, 2020)

Infection prediction using physiological and social data in social environments. - Alejandro Baldominos; Hasan Ogul; Ricardo Colomo-Palacios; José Sanz Moreno; José Manuel Gómez-Pulido (Inf. Process. Manag., 2020)

A deep learning approach for sepsis monitoring via severity score estimation. - Tunç Asuroglu; Hasan Ogul (Comput. Methods Programs Biomed., 2021)

Identifying the tumor location-associated candidate genes in development of new drugs for colorectal cancer using machine-learning-based approach. - Tuncay Bayrak; Zafer Çetin; E. Ilker Saygili; Hasan Ogul (Medical Biol. Eng. Comput., 2022)

Unsupervised Learning for Automatic Speech Recognition in Air Traffic Control Environment. - Lars Formoe; Dan Bruun Mygind; Espen Løkke; Hasan Ogul (TSD, 2023)

MobileNet-SVM: A Lightweight Deep Transfer Learning Model to Diagnose BCH Scans for IoMT-Based Imaging Sensors. - Roseline Oluwaseun Ogundokun; Sanjay Misra; Akinyemi Omololu Akinrotimi; Hasan Ogul (Sensors, 2023)

Enhancing Question Answering in Lecture Videos with a Multimodal Retrieval-Augmented Generation Framework. - Thomas Tanner; Andreas Marfurt; Hasan Ogul (AIMSA, 2024)

Text-based experiment retrieval in genomic databases. - Duygu Dede Sener; Hasan Ogul; Selen Basak (J. Inf. Sci., 2024)

Language of actions: A generative model for activity recognition and next move prediction from motion sensors. - Hasan Ogul (Expert Syst. Appl., 2025)