Mitochondria-based Renal Cell Carcinoma Subtyping: Learning from Deep vs. Flat Feature Representations. - Peter J. Schüffler; Judy Sarungbam; Hassan Muhammad; Ed Reznik; Satish K. Tickoo; Thomas J. Fuchs (MLHC, 2016)

Survival Modeling of Pancreatic Cancer with Radiology Using Convolutional Neural Networks. - Hassan Muhammad; Ida Häggström; David S. Klimstra; Thomas J. Fuchs (POCUS/BIVPCS/CuRIOUS/CPM@MICCAI, 2018)

Unsupervised Subtyping of Cholangiocarcinoma Using a Deep Clustering Convolutional Autoencoder. - Hassan Muhammad; Carlie S. Sigel; Gabriele Campanella; Thomas Börner; Linda M. Pak; Stefan Büttner; Jan N. M. IJzermans; Bas Groot Koerkamp; Michael Doukas; William R. Jarnagin; Amber L. Simpson; Thomas J. Fuchs (MICCAI (1), 2019)

Towards Unsupervised Cancer Subtyping: Predicting Prognosis Using A Histologic Visual Dictionary. - Hassan Muhammad; Carlie S. Sigel; Gabriele Campanella; Thomas Börner; Linda M. Pak; Stefan Büttner; Jan N. M. IJzermans; Bas Groot Koerkamp; Michael Doukas; William R. Jarnagin; Amber L. Simpson; Thomas J. Fuchs (CoRR, 2019)

A Quantitative Analysis on the Use of Supervised Machine Learning in Earth Science. - Katrina Virts; Ashlyn Shirey; George Priftis; Kumar Ankur; Muthukumaran Ramasubramanian; Hassan Muhammad; Ashish Acharya; Rahul Ramachandran (IGARSS, 2020)

Beyond Classification: Whole Slide Tissue Histopathology Analysis By End-To-End Part Learning. - Chensu Xie; Hassan Muhammad; Chad M. Vanderbilt; Raul Caso; Dig Vijay Kumar Yarlagadda; Gabriele Campanella; Thomas J. Fuchs (MIDL, 2020)

EPIC-Survival: End-to-end Part Inferred Clustering for Survival Analysis, with Prognostic Stratification Boosting. - Hassan Muhammad; Chensu Xie; Carlie S. Sigel; Michael Doukas; Lindsay Alpert; Amber Lea Simpson; Thomas J. Fuchs (MIDL, 2021)

EPIC-Survival: End-to-end Part Inferred Clustering for Survival Analysis, Featuring Prognostic Stratification Boosting. - Hassan Muhammad; Chensu Xie; Carlie S. Sigel; Michael Doukas; Lindsay Alpert; Thomas J. Fuchs (CoRR, 2021)