BRIGEP - the BRIDGE-based genome-transcriptome-proteome browser. - Alexander Goesmann; Burkhard Linke; Daniela Bartels; Michael Dondrup; Lutz Krause; Heiko Neuweger; Sebastian Oehm; Tobias Paczian; Andreas Wilke; Folker Meyer (Nucleic Acids Res., 2005)

CoryneCenter - An online resource for the integrated analysis of corynebacterial genome and transcriptome data. - Heiko Neuweger; Jan Baumbach; Stefan P. Albaum; Thomas Bekel; Michael Dondrup; Andrea T. Hüser; Jörn Kalinowski; Sebastian Oehm; Alfred Pühler; Sven Rahmann; Jochen Weile; Alexander Goesmann (BMC Syst. Biol., 2007)

MeltDB: a software platform for the analysis and integration of metabolomics experiment data. - Heiko Neuweger; Stefan P. Albaum; Michael Dondrup; Marcus Persicke; Tony Watt; Karsten Niehaus; Jens Stoye; Alexander Goesmann (Bioinform., 2008)

Qupe - a Rich Internet Application to take a step forward in the analysis of mass spectrometry-based quantitative proteomics experiments. - Stefan P. Albaum; Heiko Neuweger; Benjamin Fränzel; Sita Lange; Dominik Mertens; Christian Trötschel; Dirk Wolters; Jörn Kalinowski; Tim W. Nattkemper; Alexander Goesmann (Bioinform., 2009)

EMMA 2 - A MAGE-compliant system for the collaborative analysis and integration of microarray data. - Michael Dondrup; Stefan P. Albaum; Thasso Griebel; Kolja Henckel; Sebastian Jünemann; Tim Kahlke; Christiane K. Kleindt; Helge Küster; Burkhard Linke; Dominik Mertens; Virginie Mittard-Runte; Heiko Neuweger; et al. (BMC Bioinform., 2009)

Visualizing post genomics data-sets on customized pathway maps by ProMeTra - aeration-dependent gene expression and metabolism of Corynebacterium glutamicum as an example. - Heiko Neuweger; Marcus Persicke; Stefan P. Albaum; Thomas Bekel; Michael Dondrup; Andrea T. Hüser; Jörn Winnebald; Jessica Schneider; Jörn Kalinowski; Alexander Goesmann (BMC Syst. Biol., 2009)

MeltDB: a software platform for the analysis and integration of metabolomics experiment data - Heiko Neuweger (2009)

Combining peak- and chromatogram-based retention time alignment algorithms for multiple chromatography-mass spectrometry datasets. - Nils Hoffmann; Matthias Keck; Heiko Neuweger; Mathias Wilhelm 001; Petra Högy; Karsten Niehaus; Jens Stoye (BMC Bioinform., 2012)

MeltDB 2.0-advances of the metabolomics software system. - Nikolas Kessler; Heiko Neuweger; Anja Bonte; Georg Langenkämper; Karsten Niehaus; Tim W. Nattkemper; Alexander Goesmann (Bioinform., 2013)