Using credibility intervals instead of hypothesis tests in SAGE analysis. - Ricardo Z. N. Vêncio; Helena Paula Brentani; Carlos A. de B. Pereira (Bioinform., 2003)

Bayesian model accounting for within-class biological variability in Serial Analysis of Gene Expression (SAGE). - Ricardo Z. N. Vêncio; Helena Paula Brentani; Diogo F. C. Patrão; Carlos A. de B. Pereira (BMC Bioinform., 2004)

A feature selection approach for identification of signature genes from SAGE data. - Junior Barrera; Roberto Marcondes Cesar Junior; Carlos Humes Jr.; David Correa Martins Jr.; Diogo F. C. Patrão; Paulo J. S. Silva; Helena Paula Brentani (BMC Bioinform., 2007)

Simcluster: clustering enumeration gene expression data on the simplex space. - Ricardo Z. N. Vêncio; Leonardo Varuzza; Carlos A. de B. Pereira; Helena Paula Brentani; Ilya Shmulevich (BMC Bioinform., 2007)

Shortest paths ranking methodology to identify alterations in PPI networks of complex diseases. - Sérgio Nery Simões; David Correa Martins Jr.; Helena Paula Brentani; Ronaldo Fumio Hashimoto (BCB, 2012)

Development of an Ontology to Pepresent the Autistic Patient Evaluation. - Luciana Cofiel; Diogo F. C. Patrão; Ricardo Pietrobon; Helena Paula Brentani (AMIA, 2013)

Ontocloud - a Clinical Information Ontology Based Data Integration System. - Diogo F. C. Patrão; Helena Paula Brentani; Marcelo Finger; Renata Wassermann (ONTOBRAS, 2013)

Network-Based Disease Gene Prioritization by Hitting Time Analysis. - Leandro de A. Lima; Sérgio Nery Simões; Ronaldo Fumio Hashimoto; David Correa Martins Jr.; Helena Paula Brentani; Guilherme Oliveira Mota (BIBE, 2014)

Multiview Clustering on PPI Network for Gene Selection and Enrichment from Microarray Data. - Tripti Swarnkar; Sérgio Nery Simões; David Correa Martins; Anji Anurak; Helena Paula Brentani; Ronaldo Fumio Hashimoto; Pabitra Mitra (BIBE, 2014)

Identifying dense subgraphs in protein-protein interaction network for gene selection from microarray data. - Tripti Swarnkar; Sérgio Nery Simões; Anji Anurak; Helena Paula Brentani; Jyotirmoy Chatterjee; Ronaldo Fumio Hashimoto; David Correa Martins; Pabitra Mitra (Netw. Model. Anal. Health Informatics Bioinform., 2015)

NERI: network-medicine based integrative approach for disease gene prioritization by relative importance. - Sérgio Nery Simões; David Correa Martins; Carlos A. de B. Pereira; Ronaldo Fumio Hashimoto; Helena Paula Brentani (BMC Bioinform., 2015)

Uma contribuição ao auxíılio do diagnóstico do autismo a partir do processamento de imagens para extração de medidas antropométricas. - Samuel Portela Carvalho; Ariane Machado-Lima; Helena Paula Brentani; Décio Brunoni; Rodrigo Ambrósio Fock; Fátima de Lourdes dos Santos Nunes (RITA, 2016)

Autism Spectrum Disorder diagnosis based on trajectories of eye tracking data. - Thiago V. Cardoso; Gabriel C. Michelassi; Felipe O. Franco; Fernando Mitsuo Sumiya; Joana Portolese; Helena Paula Brentani; Ariane Machado-Lima; Fátima L. S. Nunes (CBMS, 2021)

Classification of Autism Spectrum Disorder Severity Using Eye Tracking Data Based on Visual Attention Model. - Mirian C. Revers; Jessica S. Oliveira; Felipe O. Franco; Joana Portolese; Thiago V. Cardoso; Andréia F. Silva; Ariane Machado-Lima; Fátima L. S. Nunes; Helena Paula Brentani (CBMS, 2021)

MicroRNA target prediction tools for animals: Where we are at and where we are going to - A systematic review. - Rayssa M. M. W. Feitosa; Paula Prieto-Oliveira; Helena Paula Brentani; Ariane Machado-Lima (Comput. Biol. Chem., 2022)

Classification of Facial Images to Assist in the Diagnosis of Autism Spectrum Disorder: A Study on the Effect of Face Detection and Landmark Identification Algorithms. - Gabriel C. Michelassi; Henrique S. Bortoletti; Tuany D. Pinheiro; Thiago Nobayashi; Fabio R. D. de Barros; Rafael Luiz Testa; Andréia F. Silva; Mirian C. Revers; Joana Portolese; Hélio Pedrini; Helena Paula Brentani; Fátima L. S. Nunes; et al. (BRACIS (2), 2023)

Computer-aided autism diagnosis using visual attention models and eye-tracking: replication and improvement proposal. - Felipe O. Franco; Jessica S. Oliveira; Joana Portolese; Fernando Mitsuo Sumiya; Andréia F. Silva; Ariane Machado-Lima; Fátima L. S. Nunes; Helena Paula Brentani (BMC Medical Informatics Decis. Mak., 2023)

Enhancing ensemble classifiers utilizing gaze tracking data for autism spectrum disorder diagnosis. - Rafaela Oliveira da Silva Sá; Gabriel de Castro Michelassi; Diego dos Santos Butrico; Felipe de Oliveira Franco; Fernando Mitsuo Sumiya; Joana Portolese; Helena Paula Brentani; Fátima L. S. Nunes; Ariane Machado-Lima (Comput. Biol. Medicine, 2024)