Data2Dynamics: a modeling environment tailored to parameter estimation in dynamical systems. - Andreas Raue; Bernhard Steiert; Max Schelker; Clemens Kreutz; Tim Maiwald; Helge Hass; Joep Vanlier; Christian Tönsing; Lorenz Adlung; Raphael Engesser; Wolfgang Mader 002; Tim Heinemann; et al. (Bioinform., 2015)

Fast integration-based prediction bands for ordinary differential equation models. - Helge Hass; Clemens Kreutz; Jens Timmer; Daniel Kaschek (Bioinform., 2016)

Identification of Cell Type-Specific Differences in Erythropoietin Receptor Signaling in Primary Erythroid and Lung Cancer Cells. - Ruth Merkle; Bernhard Steiert; Florian Salopiata; Sofia Depner; Andreas Raue; Nao Iwamoto; Max Schelker; Helge Hass; Marvin Wäsch; Martin E. Böhm; Oliver Mücke; Daniel B. Lipka; et al. (PLoS Comput. Biol., 2016)

Benchmark problems for dynamic modeling of intracellular processes. - Helge Hass; Carolin Loos; Elba Raimúndez-Álvarez; Jens Timmer; Jan Hasenauer; Clemens Kreutz (Bioinform., 2019)

Extensions of ℓ 1 regularization increase detection specificity for cell-type specific parameters in dynamic models. - Pascal Dolejsch; Helge Hass; Jens Timmer (BMC Bioinform., 2019)