A Scheme Integrating Neural Networks for Real-Time Robotic Collision Detection. - Heng Ma; David J. Cannon; Soundar R. T. Kumara (ICRA, 1995)

Human-Machine Collaboration in Robotics: Integrating Virtual Tools with a Collision Avoidance Concept using Conglomerates of Spheres. - Collin Wang; Heng Ma; David J. Cannon (J. Intell. Robotic Syst., 1997)

String Filtering of a Large String Collection on Mobile Devices using a Neural Network. - Heng Ma; Chia-Cheng Liu (JCIS, 2006)

A Greedy Approach for Multi-Symbol SMS Message Segmentation. - Liang-Chyau Sheu; Heng Ma (JCIS, 2006)

Fast Nesting of 2-D Sheet Parts With Arbitrary Shapes Using a Greedy Method and Semi-Discrete Representations. - Heng Ma; Chia-Cheng Liu (IEEE Trans Autom. Sci. Eng., 2007)

A heuristic for nesting problems of irregular shapes. - Wen-Chen Lee; Heng Ma; Bor-Wen Cheng (Comput. Aided Des., 2008)

Fast blocking of undesirable web pages on client PC by discriminating URL using neural networks. - Heng Ma (Expert Syst. Appl., 2008)

Real-time monitoring of water quality using temporal trajectory of live fish. - Heng Ma; Tsueng-Fang Tsai; Chia-Cheng Liu (Expert Syst. Appl., 2010)

A Neural-Based Scheme for Simultaneously Determining Membership and Class of String Identifiers. - Heng Ma; Ying-Chih Tseng (TAAI, 2012)

Membership classification using Integer Bloom Filter. - Hung-Yu Cheng; Heng Ma (ICIS, 2013)

A Two-Layer Scheme for Membership and Classification Querying. - Heng Ma; Hung-Yu Cheng (Kybernetes, 2013)

Spectral Clustering with Neighborhood Attribute Reduction Based on Information Entropy. - Hongjie Jia; Shifei Ding; Heng Ma; Wanqiu Xing (J. Comput., 2014)

A framework for stochastic simulations and visualization of biological electron-transfer dynamics. - C. Masato Nakano; Hye Suk Byun; Heng Ma; Tao Wei; Mohamed Y. El-Naggar (Comput. Phys. Commun., 2015)

The economic design of variable acceptance sampling plan with rectifying inspection. - Ching-Ho Yen; Heng Ma; Chi-Huang Yeh; Chia-Hao Chang (Kybernetes, 2015)

Trajectory similarity metric based on vector fields on manifold and multi-scale space partition. - Heng Ma; Meng Wang (ICNC-FSKD, 2016)

Determining the Near Optimal Architecture of Autoencoder using Correlation Analysis of the Network Weights. - Heng Ma; Yonggang Lu; Haitao Zhang (IJCCI (NCTA), 2016)

A CMAC-based scheme for determining membership with classification of text strings. - Heng Ma; Ying-Chih Tseng; Lu-I Chen (Neural Comput. Appl., 2016)

Analysis of Temperature and Gas Flow Distribution Inside Safety Helmet Based on Numerical Simulation. - Heng Ma; Rui Li; Ke Qian; Yibo Gao; Ling Chen (LSMS/ICSEE (1), 2017)

Density-based Clustering using Automatic Density Peak Detection. - Huanqian Yan; Yonggang Lu; Heng Ma (ICPRAM, 2018)

High-Bandwidth Wide-Output-Swing Linear Amplifier for LTE-100MHz Envelope Tracking. - Mingfeng Chen; Fuqiang Liu 002; Heng Ma; Zhiliang Hong (ASICON, 2019)

Dual-Loop-Controlled AC-Coupling 100MHz Bandwidth Envelope Tracking Modulator for 5G RF Power Amplifier. - Fuqiang Liu 002; Mingfeng Chen; Heng Ma; Zhiliang Hong (ASICON, 2019)

A curvature corrected bandgap reference with mismatch cancelling and noise reduction. - Dehong Lv; Heng Ma; Fuqiang Liu 002; Zhiliang Hong (ASICON, 2019)

Visual Analytics for Deep Embeddings of Large Scale Molecular Dynamics Simulations. - Junghoon Chae; Debsindhu Bhowmik; Heng Ma; Arvind Ramanathan; Chad A. Steed (IEEE BigData, 2019)

Automatic generation of tower defense levels using PCG. - Simon Cheng Liu; Chaoran Li; Yue Li; Heng Ma; Xiao Hou; Yiming Shen; Licong Wang; Ze Chen; Xianghao Guo; Hengtong Lu; Yu Du; Qinting Tang (FDG, 2019)

Deep Generative Model Driven Protein Folding Simulations. - Heng Ma; Debsindhu Bhowmik; Hyungro Lee; Matteo Turilli; Michael T. Young; Shantenu Jha; Arvind Ramanathan (PARCO, 2019)

DeepDriveMD: Deep-Learning Driven Adaptive Molecular Simulations for Protein Folding. - Hyungro Lee; Matteo Turilli; Shantenu Jha; Debsindhu Bhowmik; Heng Ma; Arvind Ramanathan (DLS@SC, 2019)

Adnexal torsion in the third trimester of pregnancy: a case report and diagnostic value of MR imaging. - Wei Bai; Xiao Xu; Haizhu Xie; Chunjuan Sun; Kaili Che; Meijie Liu; Jing Liu 079; Yinghong Shi; Heng Ma (BMC Medical Imaging, 2020)

Scalable HPC and AI Infrastructure for COVID-19 Therapeutics. - Hyungro Lee; André Merzky; Li Tan; Mikhail Titov; Matteo Turilli; Dario Alfè; Agastya Bhati; Alex Brace; Austin Clyde; Peter V. Coveney; Heng Ma; Arvind Ramanathan; et al. (CoRR, 2020)

Artificial intelligence techniques for integrative structural biology of intrinsically disordered proteins. - Arvind Ramanathan; Heng Ma; Akash Parvatikar; S. Chakra Chennubhotla (CoRR, 2020)

A Multibit Representation of Bloom Filter for Simultaneous Acquisition of Membership and Attribute Information. - Ying-Chih Tseng; Heng Ma (Int. J. Netw. Secur., 2020)

Multiclass Membership Determination Integrating an ID-Bound Method with Bloom Filter. - Lu-I Chen; Heng Ma (Inf. Technol. Control., 2020)

IMPECCABLE: Integrated Modeling PipelinE for COVID Cure by Assessing Better LEads. - Aymen Al Saadi; Dario Alfè; Yadu N. Babuji; Agastya Bhati; Ben Blaiszik; Alexander Brace; Thomas S. Brettin; Kyle Chard; Ryan Chard; Austin Clyde; Peter V. Coveney; Ian T. Foster; et al. (ICPP, 2021)

An Efficient Parallelized Huffman Decoding PE. - Yan Wu; Ruizhen Wu; Heng Ma; Lin Wang; Jianlong Su (ITCC, 2021)

Stream-AI-MD: streaming AI-driven adaptive molecular simulations for heterogeneous computing platforms. - Alexander Brace; Michael Salim; Vishal Subbiah; Heng Ma; Murali Emani; Anda Trifan; Austin R. Clyde; Corey Adams; Thomas D. Uram; Hyun Seung Yoo; Andew Hock; Jessica Liu; et al. (PASC, 2021)

Scalable HPC & AI infrastructure for COVID-19 therapeutics. - Hyungro Lee; André Merzky; Li Tan; Mikhail Titov; Matteo Turilli; Dario Alfè; Agastya Bhati; Alex Brace; Austin Clyde; Peter V. Coveney; Heng Ma; Arvind Ramanathan; et al. (PASC, 2021)

Pandemic Drugs at Pandemic Speed: Accelerating COVID-19 Drug Discovery with Hybrid Machine Learning- and Physics-based Simulations on High Performance Computers. - Agastya P. Bhati; Shunzhou Wan; Dario Alfè; Austin R. Clyde; Mathis Bode; Li Tan; Mikhail Titov; André Merzky; Matteo Turilli; Shantenu Jha; Roger R. Highfield; Walter Rocchia; et al. (CoRR, 2021)

Achieving 100X faster simulations of complex biological phenomena by coupling ML to HPC ensembles. - Alexander Brace; Hyungro Lee; Heng Ma; Anda Trifan; Matteo Turilli; Igor Yakushin; Todd S. Munson; Ian T. Foster; Shantenu Jha; Arvind Ramanathan (CoRR, 2021)

AI-driven multiscale simulations illuminate mechanisms of SARS-CoV-2 spike dynamics. - Lorenzo Casalino; Abigail C. Dommer; Zied Gaieb; Emília P. Barros; Terra Sztain; Surl-Hee Ahn; Anda Trifan; Alexander Brace; Anthony T. Bogetti; Austin Clyde; Heng Ma; Hyungro Lee; et al. (Int. J. High Perform. Comput. Appl., 2021)

Dynamic Profiling of β-Coronavirus 3CL Mpro Protease Ligand-Binding Sites. - Eunice Cho; Margarida Rosa; Ruhi Anjum; Saman Mehmood; Mariya Soban; Moniza Mujtaba; Khair Bux; Syed Tarique Moin; Mohammad Tanweer; Sarath Dantu; Alessandro Pandini; Junqi Yin; et al. (J. Chem. Inf. Model., 2021)

Coupling streaming AI and HPC ensembles to achieve 100-1000× faster biomolecular simulations. - Alexander Brace; Igor Yakushin; Heng Ma; Anda Trifan; Todd S. Munson; Ian T. Foster; Arvind Ramanathan; Hyungro Lee; Matteo Turilli; Shantenu Jha (IPDPS, 2022)

Intelligent resolution: Integrating Cryo-EM with AI-driven multi-resolution simulations to observe the severe acute respiratory syndrome coronavirus-2 replication-transcription machinery in action. - Anda Trifan; Defne Gorgun; Michael Salim; Zongyi Li; Alexander Brace; Maxim Zvyagin; Heng Ma; Austin Clyde; David Clark; David J. Hardy; Tom Burnley; Lei Huang 019; et al. (Int. J. High Perform. Comput. Appl., 2022)

High-Throughput Virtual Screening and Validation of a SARS-CoV-2 Main Protease Noncovalent Inhibitor. - Austin Clyde; Stephanie Galanie; Daniel W. Kneller; Heng Ma; Yadu N. Babuji; Ben Blaiszik; Alexander Brace; Thomas S. Brettin; Kyle Chard; Ryan Chard; Leighton Coates; Ian T. Foster; et al. (J. Chem. Inf. Model., 2022)

Ship Trajectory Generator under the Interference of Wind, Current and Waves. - Xian Ding; Hongwei Bian; Heng Ma; Rongying Wang (Sensors, 2022)

One-Step Initial Alignment Algorithm for SINS in the ECI Frame Based on the Inertial Attitude Measurement of the CNS. - Jun Tang; Hongwei Bian; Heng Ma; Rongying Wang (Sensors, 2022)

Quantitative Study of the T-AVIM-Based Simulated IMU Error in Polar Regions. - Zhe Wen; Hongwei Bian; Rongying Wang; Heng Ma (Sensors, 2022)

Initialization of SINS/GNSS Error Covariance Matrix Based on Error States Correlation. - Jun Tang; Hongwei Bian; Heng Ma; Rongying Wang (IEEE Access, 2023)

DeepSpeed4Science Initiative: Enabling Large-Scale Scientific Discovery through Sophisticated AI System Technologies. - Shuaiwen Leon Song; Bonnie Kruft; Minjia Zhang; Conglong Li; Shiyang Chen 004; Chengming Zhang 006; Masahiro Tanaka; Xiaoxia Wu; Jeff Rasley; Ammar Ahmad Awan; Connor Holmes; Martin Cai; et al. (CoRR, 2023)

#COVIDisAirborne: AI-enabled multiscale computational microscopy of delta SARS-CoV-2 in a respiratory aerosol. - Abigail C. Dommer; Lorenzo Casalino; Fiona L. Kearns; Mia A. Rosenfeld; Nicholas Wauer; Surl-Hee Ahn; John Russo 003; A. Sofia F. Oliveira; Clare Morris; Anthony T. Bogetti; Anda Trifan; Alexander Brace; et al. (Int. J. High Perform. Comput. Appl., 2023)

GenSLMs: Genome-scale language models reveal SARS-CoV-2 evolutionary dynamics. - Maxim Zvyagin; Alexander Brace; Kyle Hippe; Yuntian Deng; Bin Zhang; Cindy Orozco Bohorquez; Austin Clyde; Bharat Kale; Danilo Perez-Rivera; Heng Ma; Carla M. Mann; Michael W. Irvin; et al. (Int. J. High Perform. Comput. Appl., 2023)

Shotgun Threshold for Sparse Erdős-Rényi Graphs. - Jian Ding; Yiyang Jiang; Heng Ma (IEEE Trans. Inf. Theory, 2023)

CT differentiation of the oncocytoma and renal cell carcinoma based on peripheral tumor parenchyma and central hypodense area characterisation. - Jianyi Qu; Qianqian Zhang; Xinhong Song; Hong Jiang; Heng Ma; Wenhua Li; Xiaofei Wang (BMC Medical Imaging, 2023)

MProt-DPO: Breaking the ExaFLOPS Barrier for Multimodal Protein Design Workflows with Direct Preference Optimization. - Gautham Dharuman; Kyle Hippe; Alexander Brace; Sam Foreman; Väinö Hatanpää; Varuni Katti Sastry; Huihuo Zheng; Logan T. Ward; Servesh Muralidharan; Archit Vasan; Bharat Kale; Carla M. Mann; et al. (SC, 2024)

Binding Affinity Prediction: From Conventional to Machine Learning-Based Approaches. - Xuefeng Liu; Songhao Jiang; Xiaotian Duan; Archit Vasan; Chong Liu 007; Chih-chan Tien; Heng Ma; Thomas S. Brettin; Fangfang Xia; Ian T. Foster; Rick L. Stevens (CoRR, 2024)

Spatio-temporal evolution and convergence characteristics of urban digitalization efficiency in China: A perspective on regional coordinated development. - Heng Ma; Siliang Guo (Technol. Anal. Strateg. Manag., 2024)

HiPerRAG: High-Performance Retrieval Augmented Generation for Scientific Insights. - Ozan Gökdemir; Carlo Siebenschuh; Alexander Brace; Azton Wells; Brian Hsu; Kyle Hippe; Priyanka Setty; Aswathy Ajith; J. Gregory Pauloski; Varuni Sastry; Sam Foreman; Huihuo Zheng; et al. (PASC, 2025)

Connecting Large Language Model Agent to High Performance Computing Resource. - Heng Ma; Alexander Brace; Carlo Siebenschuh; J. Gregory Pauloski; Ian T. Foster; Arvind Ramanathan (CoRR, 2025)

Development of a melt pool characteristics detection platform based on multi-information fusion of temperature fields and photodiode signals in plasma arc welding. - Zhuangzhuang Mao; Wei Feng; Xiao Han; Heng Ma; Ce Hao; Changmeng Liu; Zhanwei Liu (J. Intell. Manuf., 2025)

HiPerRAG: High-Performance Retrieval Augmented Generation for Scientific Insights. - Ozan Gökdemir; Carlo Siebenschuh; Alexander Brace; Azton Wells; Brian Hsu; Kyle Hippe; Priyanka Vasanthakumari; Aswathy Ajith; J. Gregory Pauloski; Varuni Katti Sastry; Sam Foreman; Huihuo Zheng; et al. (CoRR, 2025)

Usefulness of the internal-to-external circle area ratio in contrast-enhanced CT to differentiate small (< 3 cm) fat-poor angiomyolipoma from renal cell carcinoma. - Xinhong Song; Wenjie Zhang; Xinyan Li; Dandan Sun; Qianqian Zhang; Heng Ma; Jianyi Qu; Xiaofei Wang (BMC Medical Imaging, 2025)