DNA sequence variation among humans and apes (abstract only). - Henrik Kaessmann; Ingo Ebersberger; Victor Wiebe; Rikard Erlandsson; Jim F. Wilson; Carsten Schwarz; Michaela Winkler; Svante Pääbo (RECOMB, 2000)

Evolutionary simulations to detect functional lineage-specific genes. - Isabelle Dupanloup; Henrik Kaessmann (Bioinform., 2006)

The evolution of lncRNA repertoires and expression patterns in tetrapods. - Anamaria Necsulea; Magali Soumillon; Maria Warnefors; Angélica Liechti; Tasman Daish; Ulrich Zeller; Julie C. Baker; Frank Grützner; Henrik Kaessmann (Nat., 2014)