PEPCAT - A new tool for conformational analysis of peptides. - M. F. O'Donohue; E. Minasian; Simon Joshua Leach; Antony W. Burgess; Herbert R. Treutlein (J. Comput. Chem., 2000)

Predicting sequences and structures of MHC-binding peptides: a computational combinatorial approach. - Jun Zeng; Herbert R. Treutlein; George B. Rudy (J. Comput. Aided Mol. Des., 2001)

Conformational analysis of thiopeptides: derivation of sp2 sulfur parameters for the CFF91 force field. - Tran Trung Tran; Herbert R. Treutlein; Antony W. Burgess (J. Comput. Chem., 2001)

Conformational analysis of thiopeptides: (, ) maps of thio-substituted dipeptides. - Tran Trung Tran; Herbert R. Treutlein; Antony W. Burgess (J. Comput. Chem., 2001)

Computational identification of epitopes in the glycoproteins of novel bunyavirus (SFTS virus) recognized by a human monoclonal antibody (MAb 4-5). - Wenshuai Zhang; Xiaoyan Zeng; Li Zhang; Haiyan Peng; Yongjun Jiao; Jun Zeng; Herbert R. Treutlein (J. Comput. Aided Mol. Des., 2013)