Running many molecular dynamics simulations on many supercomputers. - Rajib Mukherjee; Abhinav Thota; Hideki Fujioka; Thomas C. Bishop; Shantenu Jha (XSEDE, 2012)

A continuum model of interfacial surfactant transport for particle methods. - Hideki Fujioka (J. Comput. Phys., 2013)

Evaluation of Grid-Based and Grid-Free Methods to Model Microchannel Transport-Reaction. - Katharine L. Hamlington; Y.-Y. Kwan; Hideki Fujioka; Ricardo Cortez; D. P. Gaver III (SIAM J. Sci. Comput., 2013)