Nearest Neighbor Networks: clustering expression data based on gene neighborhoods. - Curtis Huttenhower; Avi I. Flamholz; Jessica N. Landis; Sauhard Sahi; Chad L. Myers; Kellen L. Olszewski; Matthew A. Hibbs; Nathan O. Siemers; Olga G. Troyanskaya; Hilary A. Coller (BMC Bioinform., 2007)

Detailing regulatory networks through large scale data integration. - Curtis Huttenhower; K. Tsheko Mutungu; Natasha Indik; Woongcheol Yang; Mark Schroeder; Joshua J. Forman; Olga G. Troyanskaya; Hilary A. Coller (Bioinform., 2009)

Computational Assessment of the Cooperativity between RNA Binding Proteins and MicroRNAs in Transcript Decay. - Peng Jiang 006; Mona Singh 001; Hilary A. Coller (PLoS Comput. Biol., 2013)