PhylOnt: A domain-specific ontology for phylogeny analysis. - Maryam Panahiazar; Ajith Ranabahu; Vahid Taslimi; Hima Yalamanchili; Arlin Stoltzfus; Jim Leebens-Mack; Amit P. Sheth (BIBM, 2012)

A graph-based recovery and decomposition of Swanson's hypothesis using semantic predications. - Delroy Cameron; Olivier Bodenreider; Hima Yalamanchili; Tu Danh; Sreeram Vallabhaneni; Krishnaprasad Thirunarayan; Amit P. Sheth; Thomas C. Rindflesch (J. Biomed. Informatics, 2013)

A Novel Approach for Classifying Gene Expression Data using Topic Modeling. - Soon Jye Kho; Hima Bindu Yalamanchili; Michael L. Raymer; Amit P. Sheth (BCB, 2017)

Latent Dirichlet Allocation for Classification using Gene Expression Data. - Hima Bindu Yalamanchili; Soon Jye Kho; Michael L. Raymer (BIBE, 2017)