Controlling diurnal rhythms by light. - Bijoy K. Ghosh; Himadri B. Pakrasi; Thanura R. Elvitigala (ICARCV, 2008)

Modeling diurnal rhythms with an array of phase dynamic oscillators. - Wenxue Wang; Himadri B. Pakrasi; Bijoy K. Ghosh (ICARCV, 2008)

Modeling and simulation of diurnal biological processes in cyanobacteria. - Thanura R. Elvitigala; Himadri B. Pakrasi; Bijoy K. Ghosh (ACC, 2009)

Bayesian network approach to understand regulation of biological processes in cyanobacteria. - Thanura R. Elvitigala; Abhay K. Singh; Himadri B. Pakrasi; Bijoy K. Ghosh (CDC, 2009)

Integrative analysis of large scale expression profiles reveals core transcriptional response and coordination between multiple cellular processes in a cyanobacterium. - Abhay K. Singh; Thanura R. Elvitigala; Jeffrey C. Cameron; Bijoy K. Ghosh; Maitrayee Bhattacharyya-Pakrasi; Himadri B. Pakrasi (BMC Syst. Biol., 2010)

Dynamic proteomic profiling of a unicellular cyanobacterium Cyanothece ATCC51142 across light-dark diurnal cycles. - Uma K. Aryal; Jana Stöckel; Ravi K. Krovvidi; Marina A. Gritsenko; Matthew E. Monroe; Ronald J. Moore; David W. Koppenaal; Richard D. Smith; Himadri B. Pakrasi; Jon M. Jacobs (BMC Syst. Biol., 2011)

Identification and Modeling of Genes with Diurnal Oscillations from Microarray Time Series Data. - Wenxue Wang; Bijoy K. Ghosh; Himadri B. Pakrasi (IEEE ACM Trans. Comput. Biol. Bioinform., 2011)

Rapid construction of metabolic models for a family of Cyanobacteria using a multiple source annotation workflow. - Thomas J. Mueller; Bertram M. Berla; Himadri B. Pakrasi; Costas D. Maranas (BMC Syst. Biol., 2013)

A diurnal flux balance model of Synechocystis sp. PCC 6803 metabolism. - Debolina Sarkar; Thomas J. Mueller; Deng Liu; Himadri B. Pakrasi; Costas D. Maranas (PLoS Comput. Biol., 2019)

Elucidation of trophic interactions in an unusual single-cell nitrogen-fixing symbiosis using metabolic modeling. - Debolina Sarkar; Marine Landa; Anindita Bandyopadhyay; Himadri B. Pakrasi; Jonathan P. Zehr; Costas D. Maranas (PLoS Comput. Biol., 2021)