ReTrOS: a MATLAB toolbox for reconstructing transcriptional activity from gene and protein expression data. - Giorgos Minas; Hiroshi Momiji; Dafyd J. Jenkins; Maria J. Costa; David A. Rand; Bärbel Finkenstädt (BMC Bioinform., 2017)

Disentangling juxtacrine from paracrine signalling in dynamic tissue. - Hiroshi Momiji; Kirsty L. Hassall; Karen Featherstone; Anne V. McNamara; Amanda L. Patist; David G. Spiller; Helen C. Christian; Michael R. H. White; Julian R. E. Davis; Bärbel F. Finkenstädt; David A. Rand (PLoS Comput. Biol., 2019)