MAPS: a microarray project system for gene expression experiment information and data validation. - Pierre R. Bushel; Hisham Hamadeh; Lee Bennett; Stella Sieber; Karla Martin; Emile F. Nuwaysir; Kate Johnson; Kelli Reynolds; Richard S. Paules; Cynthia A. Afshari (Bioinform., 2001)

Assessing Gene Significance from cDNA Microarray Expression Data via Mixed Models. - Russell D. Wolfinger; Greg Gibson; Elizabeth D. Wolfinger; Lee Bennett; Hisham Hamadeh; Pierre R. Bushel; Cynthia A. Afshari; Richard S. Paules (J. Comput. Biol., 2001)

Computational selection of distinct class- and subclass-specific gene expression signatures. - Pierre R. Bushel; Hisham Hamadeh; Lee Bennett; James Green; Alan Ableson; Stephen Misener; Cynthia A. Afshari; Richard S. Paules (J. Biomed. Informatics, 2002)

High-throughput and efficient multilocus genome-wide association study on longitudinal outcomes. - Huang Xu 005; Xiang Li; Yaning Yang; Yi Li; Jose Pinheiro; Kate Sasser; Hisham Hamadeh; Xu Steven 001; Min Yuan (Bioinform., 2020)

Improving accuracy of GPT-3/4 results on biomedical data using a retrieval-augmented language model. - David Soong; Sriram Sridhar 003; Han Si; Jan-Samuel Wagner; Ana Caroline Costa Sá; Christina Y. Yu; Kubra Karagoz; Meijian Guan; Hisham Hamadeh; Brandon W. Higgs (CoRR, 2023)

UniTox: Leveraging LLMs to Curate a Unified Dataset of Drug-Induced Toxicity from FDA Labels. - Jacob Silberg; Kyle Swanson; Elana Simon; Angela Zhang; Zaniar Ghazizadeh; Scott Ogden; Hisham Hamadeh; James Y. Zou (NeurIPS, 2024)

CELI: Controller-Embedded Language Model Interactions. - Jan-Samuel Wagner; Dave DeCaprio; Abishek Chiffon Muthu Raja; Jonathan M. Holman; Lauren K. Brady; Sky C. Cheung; Hosein Barzekar; Eric Yang; Mark Anthony Martinez II; David Soong; Sriram Sridhar 003; Han Si; et al. (CoRR, 2024)