Integer Linear Programming Approach to Median and Center Strings for a Probability Distribution on a Set of Strings. - Morihiro Hayashida; Hitoshi Koyano (BIOINFORMATICS, 2016)

Finding Median and Center Strings for a Probability Distribution on a Set of Strings Under Levenshtein Distance Based on Integer Linear Programming. - Morihiro Hayashida; Hitoshi Koyano (BIOSTEC (Selected Papers), 2016)

Grammar-based Compression for Directed and Undirected Generalized Series-parallel Graphs using Integer Linear Programming. - Morihiro Hayashida; Hitoshi Koyano; Tatsuya Akutsu (BIOINFORMATICS, 2018)

Improving conditional random field model for prediction of protein-RNA residue-base contacts. - Morihiro Hayashida; Noriyuki Okada; Mayumi Kamada; Hitoshi Koyano (Quant. Biol., 2018)

Artificial Neural Network Approach to Prediction of Protein-RNA Residue-base Contacts. - Morihiro Hayashida; Jose C. Nacher; Hitoshi Koyano (BIOINFORMATICS, 2019)

Optimal string clustering based on a Laplace-like mixture and EM algorithm on a set of strings. - Hitoshi Koyano; Morihiro Hayashida; Tatsuya Akutsu (J. Comput. Syst. Sci., 2019)

Measuring the Similarity of Proteomes using Grammar-based Compression via Domain Combinations. - Morihiro Hayashida; Hitoshi Koyano; Jose C. Nacher (BIOINFORMATICS, 2020)

Volume formula and growth rates of the balls of strings under the edit distances. - Hitoshi Koyano; Morihiro Hayashida (Appl. Math. Comput., 2023)