SMLocalizer, a GPU accelerated ImageJ plugin for single molecule localization microscopy. - Kristoffer Bernhem; Hjalmar Brismar (Bioinform., 2018)

Joint Image Deconvolution and Separation Using Mixed Dictionaries. - Medya Siadat; Nasser Aghazadeh; Farideh Akbarifard; Hjalmar Brismar; Ozan Öktem (IEEE Trans. Image Process., 2019)

Data-driven multi-agent modelling of calcium interactions in cell culture: PINN vs Regularized Least-squares. - Aurora Poggi; Giuseppe Alessio D'Inverno; Hjalmar Brismar; Ozan Öktem; Matthieu Barreau; Kateryna Morozovska (CoRR, 2025)