An integration of deep learning with feature fusion for protein-protein interaction prediction. - Hoai-Nhan Tran; Phuc-Xuan-Quynh Nguyen; Xiaoqing Peng; Jianxin Wang 001 (BIBM, 2022)

DeepCF-PPI: improved prediction of protein-protein interactions by combining learned and handcrafted features based on attention mechanisms. - Hoai-Nhan Tran; Quynh Nguyen Phuc Xuan; Tuong Tri Nguyen (Appl. Intell., 2023)

A Deep Metric Learning Based Method for Predicting MiRNA-Disease Associations. - Phuc-Xuan-Quynh Nguyen; Hoai-Nhan Tran; Cheng Yan; Jianxin Wang 001 (ISBRA (1), 2024)

Combining handcrafted and learned features using deep learning to improve protein-protein interaction prediction performance. - Hoai-Nhan Tran; Quynh Nguyen Phuc Xuan; Le Anh Phuong (J. Inf. Telecommun., 2025)