Modeling SAGE tag formation and its effects on data interpretation within a Bayesian framework. - Michael A. Gilchrist; Hong Qin 003; Russell L. Zaretzki (BMC Bioinform., 2007)

Detection of Changes in Transitive Associations by Shortest-path Analysis of Protein Interaction Networks Integrated with Gene Expression Profiles. - Hong Qin 003; Li Yang 001 (BMEI (1), 2008)

Teaching computational thinking through bioinformatics to biology students. - Hong Qin 003 (SIGCSE, 2009)

Estimating network changes from lifespan measurements using a parsimonious gene network model of cellular aging. - Hong Qin 003 (BMC Bioinform., 2019)

A Suggestion of Converting Protein Intrinsic Disorder to Structural Entropy Using Shannon's Information Theory. - Hao-Bo Guo; Yue Ma; Gerald A. Tuskan; Hong Qin 003; Xiaohan Yang; Hong Guo (Entropy, 2019)

Application Note: μPolar - An Interactive 2D Visualization Tool for Microscopic Time-Series Images. - Mehran Ghafari; Daniel Mailman; Hong Qin 003 (CSCI, 2021)

Editorial: AI-Enabled Data Science for COVID-19. - Da Yan 001; Hong Qin 003; Hsiang-Yun Wu; Jake Y. Chen (Frontiers Big Data, 2021)

A Comparison of YOLO and Mask-RCNN for Detecting Cells from Microfluidic Images. - Mehran Ghafari; Daniel Mailman; Parisa Hatami; Trevor Peyton; Li Yang 001; Weiwei Dang; Hong Qin 003 (ICAIIC, 2022)

Shifting Trends of COVID-19 Tweet Sentiment with Respect to Voting Preferences in the 2020 Election Year of the United States. - Megan Doman; Jacob Motley; Hong Qin 003; Mengjun Xie; Li Yang 001 (CoRR, 2022)

Guest Editorial for Selected Papers From BIOKDD 2020. - Da Yan 001; Hong Qin 003; Hsiang-Yun Wu; Jake Y. Chen (IEEE ACM Trans. Comput. Biol. Bioinform., 2022)

Autism Detection of MRI Brain Images Using Hybrid Deep CNN With DM-Resnet Classifier. - Sweta Jain; Hrudaya Kumar Tripathy; Saurav Mallik; Hong Qin 003; Yara Shaalan; Khaled Shaalan (IEEE Access, 2023)

PCOBL: A Novel Opposition-Based Learning Strategy to Improve Metaheuristics Exploration and Exploitation for Solving Global Optimization Problems. - Tapas Si; Debolina Bhattacharya; Somen Nayak; Péricles B. C. Miranda; Utpal Nandi; Saurav Mallik; Ujjwal Maulik; Hong Qin 003 (IEEE Access, 2023)

Unlocking Blockchain Interconnectivity: Smart Contract-Driven Cross-Chain Communication. - Kirtirajsinh Zala; Vyom Modi; Deepakkumar Giri; Biswaranjan Acharya; Saurav Mallik; Hong Qin 003 (IEEE Access, 2023)

Towards Trustworthy Artificial Intelligence for Equitable Global Health. - Hong Qin 003; Jude Kong; Wandi Ding; Ramneek Ahluwalia; Christo El-Morr; Zeynep Engin; Jake Okechukwu Effoduh; Rebecca Hwa; Serena Jingchuan Guo; Laleh Seyyed-Kalantari; Sylvia Kiwuwa Muyingo; Candace Makeda Moore; et al. (CoRR, 2023)

Auguring Fake Face Images Using Dual Input Convolution Neural Network. - Mohan Bhandari; Arjun Neupane; Saurav Mallik; Loveleen Gaur; Hong Qin 003 (J. Imaging, 2023)

Multi-Objective artificial bee colony optimized hybrid deep belief network and XGBoost algorithm for heart disease prediction. - Kanak Kalita; Narayanan Ganesh; Sambandam Jayalakshmi; Jasgurpreet Singh Chohan; Saurav Mallik; Hong Qin 003 (Frontiers Digit. Health, 2023)

Efficient Federated Learning with Multi-Teacher Knowledge Distillation for COVID-19 Detection. - Richard Annan; Hong Qin 003; Xiaohong Yuan; Kaushik Roy 003; Robert H. Newman; Letu Qingge (BCB, 2024)

Opposition-Based Chaotic Tunicate Swarm Algorithms for Global Optimization. - Tapas Si; Péricles B. C. Miranda; Utpal Nandi; Nanda Dulal Jana; Saurav Mallik; Ujjwal Maulik; Hong Qin 003 (IEEE Access, 2024)

Explainable convolutional neural network model provides an alternative genome-wide association perspective on mutations in SARS-CoV-2. - Parisa Hatami; Richard Annan; Luis Urias Miranda; Jane Gorman; Mengjun Xie; Letu Qingge; Hong Qin 003 (CoRR, 2024)

Fuzzy Markov model for the reliability analysis of hybrid microgrids. - Kunja Bihari Swain; Murthy Cherukuri; Indu Sekhar Samanta; Abhilash Pati; Jayant P. Giri; Amrutanshu Panigrahi; Hong Qin 003; Saurav Mallik (Frontiers Comput. Sci., 2024)

Heuristic machine learning approaches for identifying phishing threats across web and email platforms. - Ramprasath Jayaprakash; Krishnaraj Natarajan; J. Alfred Daniel; Chandru Vignesh Chinnappan; Jayant Giri; Hong Qin 003; Saurav Mallik (Frontiers Artif. Intell., 2024)

Weighted Bayesian Belief Network for diabetics: a predictive model. - Shweta Kharya; Sunita Soni; Abhilash Pati; Amrutanshu Panigrahi; Jayant P. Giri; Hong Qin 003; Saurav Mallik; Debasish Swapnesh Kumar Nayak; Tripti Swarnkar (Frontiers Artif. Intell., 2024)

Spatiotemporal Analysis of Urban Forest in Chattanooga, Tennessee from 1984 to 2021 Using Landsat Satellite Imagery. - William Stuart; A. K. M. Azad Hossain; Nyssa Hunt; Charles Mix; Hong Qin 003 (Remote. Sens., 2024)

A data-driven sliding-window pairwise comparative approach for the estimation of transmission fitness of SARS-CoV-2 variants and construction of the evolution fitness landscape. - Md Jubair Pantho; Richard Annan; Landen Alexander Bauder; Sophia Huang; Letu Qingge; Hong Qin 003 (Quant. Biol., 2025)