PET-Tool: a software suite for comprehensive processing and managing of Paired-End diTag (PET) sequence data. - Kuo Ping Chiu; Chee-Hong Wong; Qiongyu Chen; Pramila Ariyaratne; Hong Sain Ooi; Chia-Lin Wei; Wing-Kin Sung; Yijun Ruan (BMC Bioinform., 2006)

ANNIE: integrated de novo protein sequence annotation. - Hong Sain Ooi; Chia Yee Kwoh; Michael Wildpaner; Fernanda L. Sirota; Birgit Eisenhaber; Sebastian Maurer-Stroh; Wing-Cheong Wong; Alexander Schleiffer; Frank Eisenhaber; Georg Schneider 001 (Nucleic Acids Res., 2009)