Layout and Post-Processing of Transcriptional Modules. - Hong Sun 002; Tim Van den Bulcke; Bart De Moor; Karen Lemmens; Kristof Engelen; Kathleen Marchal (IJCBS, 2009)

ViTraM: visualization of transcriptional modules. - Hong Sun 002; Karen Lemmens; Tim Van den Bulcke; Kristof Engelen; Bart De Moor; Kathleen Marchal (Bioinform., 2009)

ModuleDigger: an itemset mining framework for the detection of cis-regulatory modules. - Hong Sun 002; Tijl De Bie; Valerie Storms; Qiang Fu 009; Thomas Dhollander; Karen Lemmens; Annemieke Verstuyf; Bart De Moor; Kathleen Marchal (BMC Bioinform., 2009)

Cis-regulatory module detection using constraint programming. - Tias Guns; Hong Sun 002; Kathleen Marchal; Siegfried Nijssen (BIBM, 2010)

Computational Discovery of Cis-Regulatory Modules Based on Itemset Mining (Computationele detectie van cis-regulatorische modules gebaseerd op itemset mining). - Hong Sun 002 (2011)

MotifSuite: workflow for probabilistic motif detection and assessment. - Marleen Claeys; Valerie Storms; Hong Sun 002; Tom Michoel; Kathleen Marchal (Bioinform., 2012)