GABAagent: a system for integrating data on GABA receptors. - Abdelkrim Rachedi; Michael Rebhan; Hong Xue 001 (Bioinform., 2000)

SNPHarvester: a filtering-based approach for detecting epistatic interactions in genome-wide association studies. - Can Yang 002; Zengyou He; Xiang Wan; Qiang Yang 001; Hong Xue 001; Weichuan Yu (Bioinform., 2009)

MegaSNPHunter: a learning approach to detect disease predisposition SNPs and high level interactions in genome wide association study. - Xiang Wan; Can Yang 002; Qiang Yang 001; Hong Xue 001; Nelson L. S. Tang; Weichuan Yu (BMC Bioinform., 2009)

Semi-supervised protein subcellular localization. - Qian Xu 005; Derek Hao Hu; Hong Xue 001; Weichuan Yu; Qiang Yang 001 (BMC Bioinform., 2009)

SimpleTrPPI: A simple method for transferring knowledge between interaction networks for PPI prediction. - Qian Xu 005; Derek Hao Hu; Qiang Yang 001; Hong Xue 001 (BIBM Workshops, 2010)

Predicting chemical activities from structures by attributed molecular graph classification. - Qian Xu 005; Derek Hao Hu; Hong Xue 001; Qiang Yang 001 (CIBCB, 2010)

Predictive rule inference for epistatic interaction detection in genome-wide association studies. - Xiang Wan; Can Yang 002; Qiang Yang 001; Hong Xue 001; Nelson L. S. Tang; Weichuan Yu (Bioinform., 2010)

Detecting two-locus associations allowing for interactions in genome-wide association studies. - Xiang Wan; Can Yang 002; Qiang Yang 001; Hong Xue 001; Nelson L. S. Tang; Weichuan Yu (Bioinform., 2010)

Multi-task learning for cross-platform siRNA efficacy prediction: an in-silico study. - Qi Liu 019; Qian Xu 005; Vincent Wenchen Zheng; Hong Xue 001; Zhi-Wei Cao; Qiang Yang 001 (BMC Bioinform., 2010)

Identifying main effects and epistatic interactions from large-scale SNP data via adaptive group Lasso. - Can Yang 002; Xiang Wan; Qiang Yang 001; Hong Xue 001; Weichuan Yu (BMC Bioinform., 2010)

BOOST: A fast approach to detecting gene-gene interactions in genome-wide case-control studies - Xiang Wan; Can Yang 002; Qiang Yang 001; Hong Xue 001; Xiaodan Fan; Nelson L. S. Tang; Weichuan Yu (CoRR, 2010)

Identifying disease-associated SNP clusters via contiguous outlier detection. - Can Yang 002; Xiaowei Zhou 001; Xiang Wan; Qiang Yang 001; Hong Xue 001; Weichuan Yu (Bioinform., 2011)

The choice of null distributions for detecting gene-gene interactions in genome-wide association studies. - Can Yang 002; Xiang Wan; Zengyou He; Qiang Yang 001; Hong Xue 001; Weichuan Yu (BMC Bioinform., 2011)

A hidden two-locus disease association pattern in genome-wide association studies. - Can Yang 002; Xiang Wan; Qiang Yang 001; Hong Xue 001; Nelson L. S. Tang; Weichuan Yu (BMC Bioinform., 2011)

Multi-platform gene-expression mining and marker gene analysis. - Qian Xu 005; Hong Xue 001; Qiang Yang 001 (Int. J. Data Min. Bioinform., 2011)

Multitask Learning for Protein Subcellular Location Prediction. - Qian Xu 005; Sinno Jialin Pan; Hannah Hong Xue; Qiang Yang 001 (IEEE ACM Trans. Comput. Biol. Bioinform., 2011)

Copy number variation analysis based on AluScan sequences. - Jian-Feng Yang; Xiao-Fan Ding; Lei Chen 089; Wai-Kin Mat; Michelle Xu; Jin-Fei Chen; Jianmin Wang; Lin Xu; Wai-Sang Poon; Ava Kwong; Gilberto Leung; Tze-Ching Tan; et al. (J. Clin. Bioinform., 2014)

SAMSVM: A tool for misalignment filtration of SAM-format sequences with support vector machine. - Jian-Feng Yang; Xiao-Fan Ding; Xing Sun; Shui-Ying Tsang; Hong Xue 001 (J. Bioinform. Comput. Biol., 2015)