Hong Yu
Affiliations:- University of Massachusetts Lowell, MA, USA
- University of Massachusetts Amherst, MA, USA
- University of Wisconsin-Milwaukee, WI, USA (former)
- Columbia University, NY, USA (PhD)
According to our database1,
Hong Yu
authored at least 137 papers
between 1999 and 2024.
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Bibliography
2024
CoRR, 2024
JMLR: Joint Medical LLM and Retrieval Training for Enhancing Reasoning and Professional Question Answering Capability.
CoRR, 2024
SYNFAC-EDIT: Synthetic Imitation Edit Feedback for Factual Alignment in Clinical Summarization.
CoRR, 2024
LocalTweets to LocalHealth: A Mental Health Surveillance Framework Based on Twitter Data.
CoRR, 2024
2023
J. Am. Medical Informatics Assoc., July, 2023
Evaluating the efficacy of NoteAid on EHR note comprehension among US Veterans through Amazon Mechanical Turk.
Int. J. Medical Informatics, April, 2023
README: Bridging Medical Jargon and Lay Understanding for Patient Education through Data-Centric NLP.
CoRR, 2023
Do Physicians Know How to Prompt? The Need for Automatic Prompt Optimization Help in Clinical Note Generation.
CoRR, 2023
SELF-EXPLAIN: Teaching Large Language Models to Reason Complex Questions by Themselves.
CoRR, 2023
CoRR, 2023
BioInstruct: Instruction Tuning of Large Language Models for Biomedical Natural Language Processing.
CoRR, 2023
NoteChat: A Dataset of Synthetic Doctor-Patient Conversations Conditioned on Clinical Notes.
CoRR, 2023
CoRR, 2023
Early Prediction of Alzheimers Disease Leveraging Symptom Occurrences from Longitudinal Electronic Health Records of US Military Veterans.
CoRR, 2023
ODD: A Benchmark Dataset for the NLP-based Opioid Related Aberrant Behavior Detection.
CoRR, 2023
Vision Meets Definitions: Unsupervised Visual Word Sense Disambiguation Incorporating Gloss Information.
Proceedings of the 61st Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers), 2023
Revisiting the Architectures like Pointer Networks to Efficiently Improve the Next Word Distribution, Summarization Factuality, and Beyond.
Proceedings of the Findings of the Association for Computational Linguistics: ACL 2023, 2023
UMASS_BioNLP at MEDIQA-Chat 2023: Can LLMs generate high-quality synthetic note-oriented doctor-patient conversations?
Proceedings of the 5th Clinical Natural Language Processing Workshop, 2023
Proceedings of the Thirty-Seventh AAAI Conference on Artificial Intelligence, 2023
2022
Enhancing the prediction of disease outcomes using electronic health records and pretrained deep learning models.
CoRR, 2022
Associations Between Natural Language Processing (NLP) Enriched Social Determinants of Health and Suicide Death among US Veterans.
CoRR, 2022
An Automatic SOAP Classification System Using Weakly Supervision And Transfer Learning.
CoRR, 2022
Context Variance Evaluation of Pretrained Language Models for Prompt-based Biomedical Knowledge Probing.
CoRR, 2022
Proceedings of the 2022 Conference of the North American Chapter of the Association for Computational Linguistics: Human Language Technologies, 2022
Proceedings of the 2022 Conference of the North American Chapter of the Association for Computational Linguistics: Human Language Technologies, 2022
MedJEx: A Medical Jargon Extraction Model with Wiki's Hyperlink Span and Contextualized Masked Language Model Score.
Proceedings of the 2022 Conference on Empirical Methods in Natural Language Processing, 2022
Proceedings of the Findings of the Association for Computational Linguistics: EMNLP 2022, 2022
Proceedings of the 29th International Conference on Computational Linguistics, 2022
Extracting Biomedical Factual Knowledge Using Pretrained Language Model and Electronic Health Record Context.
Proceedings of the AMIA 2022, 2022
Proceedings of the AMIA 2022, 2022
Proceedings of the 13th International Workshop on Health Text Mining and Information Analysis, 2022
2021
Knowl. Based Syst., 2021
Epinoter: A Natural Language Processing Tool for Epidemiological Studies.
Proceedings of the 14th International Joint Conference on Biomedical Engineering Systems and Technologies, 2021
Proceedings of the 59th Annual Meeting of the Association for Computational Linguistics and the 11th International Joint Conference on Natural Language Processing, 2021
2020
Proceedings of the Findings of the Association for Computational Linguistics: EMNLP 2020, 2020
Proceedings of the Findings of the Association for Computational Linguistics: EMNLP 2020, 2020
Proceedings of the 28th International Conference on Computational Linguistics, 2020
Proceedings of the AMIA 2020, 2020
Bleeding Entity Recognition in Electronic Health Records: A Comprehensive Analysis of End-to-End Systems.
Proceedings of the AMIA 2020, 2020
Proceedings of the AMIA 2020, 2020
Proceedings of the 58th Annual Meeting of the Association for Computational Linguistics: System Demonstrations, 2020
Proceedings of the 58th Annual Meeting of the Association for Computational Linguistics, 2020
ICD Coding from Clinical Text Using Multi-Filter Residual Convolutional Neural Network.
Proceedings of the Thirty-Fourth AAAI Conference on Artificial Intelligence, 2020
2019
Learning to detect and understand drug discontinuation events from clinical narratives.
J. Am. Medical Informatics Assoc., 2019
An investigation of single-domain and multidomain medication and adverse drug event relation extraction from electronic health record notes using advanced deep learning models.
J. Am. Medical Informatics Assoc., 2019
Aust. J. Intell. Inf. Process. Syst., 2019
Proceedings of the Machine Learning for Healthcare Conference, 2019
Proceedings of the 25th ACM SIGKDD International Conference on Knowledge Discovery & Data Mining, 2019
Proceedings of the 2019 Conference on Empirical Methods in Natural Language Processing and the 9th International Joint Conference on Natural Language Processing, 2019
Learning Latent Parameters without Human Response Patterns: Item Response Theory with Artificial Crowds.
Proceedings of the 2019 Conference on Empirical Methods in Natural Language Processing and the 9th International Joint Conference on Natural Language Processing, 2019
Proceedings of The 5th Workshop on BioNLP Open Shared Tasks, 2019
Extracting Drug-drug Interactions with a Dependency-based Graph Convolution Neural Network.
Proceedings of the 2019 IEEE International Conference on Bioinformatics and Biomedicine, 2019
2018
HYPE: A High Performing NLP System for Automatically Detecting Hypoglycemia Events from Electronic Health Record Notes.
CoRR, 2018
Proceedings of the 2018 Conference of the North American Chapter of the Association for Computational Linguistics: Human Language Technologies, 2018
Understanding Deep Learning Performance through an Examination of Test Set Difficulty: A Psychometric Case Study.
Proceedings of the 2018 Conference on Empirical Methods in Natural Language Processing, Brussels, Belgium, October 31, 2018
Accuracy of International Classification of Disease Clinical Modification Codes for Detecting Bleeding Events in Electronic Health Records and When to Use Them.
Proceedings of the AMIA 2018, 2018
Reference Standard Development to Train Natural Language Processing Algorithms to Detect Problematic Buprenorphine-Naloxone Therapy.
Proceedings of the AMIA 2018, 2018
Proceedings of the AMIA 2018, 2018
2017
Unsupervised ensemble ranking of terms in electronic health record notes based on their importance to patients.
J. Biomed. Informatics, 2017
Proceedings of the 34th International Conference on Machine Learning, 2017
Proceedings of the 5th International Conference on Learning Representations, 2017
Exploiting PubMed for Protein Molecular Function Prediction via NMF Based Multi-label Classification.
Proceedings of the 2017 IEEE International Conference on Data Mining Workshops, 2017
Proceedings of the 15th Conference of the European Chapter of the Association for Computational Linguistics, 2017
Proceedings of the 15th Conference of the European Chapter of the Association for Computational Linguistics, 2017
Proceedings of the AMIA 2017, 2017
A hybrid Neural Network Model for Joint Prediction of Medical Presence and Period Assertions in Clinical Notes.
Proceedings of the AMIA 2017, 2017
Generating a Test of Electronic Health Record Narrative Comprehension with Item Response Theory.
Proceedings of the AMIA 2017, 2017
2016
Learning for Biomedical Information Extraction: Methodological Review of Recent Advances.
CoRR, 2016
CoRR, 2016
Bidirectional Recurrent Neural Networks for Medical Event Detection in Electronic Health Records.
CoRR, 2016
Ranking medical jargon in electronic health record notes by adapted distant supervision.
CoRR, 2016
Proceedings of the NAACL HLT 2016, 2016
Proceedings of the 2016 Conference on Empirical Methods in Natural Language Processing, 2016
Proceedings of the 2016 Conference on Empirical Methods in Natural Language Processing, 2016
Proceedings of the Seventh International Workshop on Health Text Mining and Information Analysis, 2016
2015
Proceedings of the 2015 Conference on Empirical Methods in Natural Language Processing, 2015
Rethinking Document Retrieval for Scientific Literature: A Learning to Rank Approach.
Proceedings of the AMIA 2015, 2015
Proceedings of the Sixth International Workshop on Health Text Mining and Information Analysis, 2015
Proceedings of the Sixth International Workshop on Health Text Mining and Information Analysis, 2015
2014
Automatically Detecting Acute Myocardial Infarction Events from EHR Text: A Preliminary Study.
Proceedings of the AMIA 2014, 2014
2013
Proceedings of the MEDINFO 2013, 2013
Proceedings of the MEDINFO 2013, 2013
Proceedings of the MEDINFO 2013, 2013
2012
J. Am. Medical Informatics Assoc., 2012
Proceedings of the AMIA 2012, 2012
2011
Toward automated consumer question answering: Automatically separating consumer questions from professional questions in the healthcare domain.
J. Biomed. Informatics, 2011
J. Biomed. Informatics, 2011
J. Biomed. Informatics, 2011
Towards spoken clinical-question answering: evaluating and adapting automatic speech-recognition systems for spoken clinical questions.
J. Am. Medical Informatics Assoc., 2011
Comput. Biol. Medicine, 2011
Simple and efficient machine learning frameworks for identifying protein-protein interaction relevant articles and experimental methods used to study the interactions.
BMC Bioinform., 2011
2010
IEEE ACM Trans. Comput. Biol. Bioinform., 2010
J. Biomed. Informatics, 2010
Detecting hedge cues and their scope in biomedical text with conditional random fields.
J. Biomed. Informatics, 2010
J. Am. Medical Informatics Assoc., 2010
J. Am. Medical Informatics Assoc., 2010
2009
Automatically classifying sentences in full-text biomedical articles into Introduction, Methods, Results and Discussion.
Bioinform., 2009
Proceedings of the BioNLP Workshop, BioNLP@HLT-NAACL 2009, 2009
Proceedings of the AMIA 2009, 2009
FigSum: Automatically Generating Structured Text Summaries for Figures in Biomedical Literature.
Proceedings of the AMIA 2009, 2009
2008
Proceedings of the Workshop on Current Trends in Biomedical Natural Language Processing, 2008
Proceedings of the AMIA 2008, 2008
2007
Development, implementation, and a cognitive evaluation of a definitional question answering system for physicians.
J. Biomed. Informatics, 2007
Using MEDLINE as a knowledge source for disambiguating abbreviations and acronyms in full-text biomedical journal articles.
J. Biomed. Informatics, 2007
J. Biomed. Informatics, 2007
2006
A large scale, corpus-based approach for automatically disambiguating biomedical abbreviations.
ACM Trans. Inf. Syst., 2006
BMC Bioinform., 2006
Proceedings of the Human Language Technology Conference of the North American Chapter of the Association of Computational Linguistics, 2006
Proceedings of the Proceedings 14th International Conference on Intelligent Systems for Molecular Biology 2006, 2006
Proceedings of the Workshop on Linking Natural Language and Biology, 2006
Proceedings of the AMIA 2006, 2006
Extracting Opinion Propositions and Opinion Holders using Syntactic and Lexical Cues.
Proceedings of the Computing Attitude and Affect in Text: Theory and Applications, 2006
2005
Proceedings of the AMIA 2005, 2005
2004
GeneWays: a system for extracting, analyzing, visualizing, and integrating molecular pathway data.
J. Biomed. Informatics, 2004
Using MEDLINE as a Knowledge Source for Disambiguating Abbreviations in Full-Text Biomedical Journal Articles.
Proceedings of the 17th IEEE Symposium on Computer-Based Medical Systems (CBMS 2004), 2004
2002
J. Biomed. Informatics, 2002
J. Am. Medical Informatics Assoc., 2002
Proceedings of The Eleventh Text REtrieval Conference, 2002
Proceedings of the AMIA 2002, 2002
2001
GENIES: a natural-language processing system for the extraction of molecular pathways from journal articles.
Proceedings of the Ninth International Conference on Intelligent Systems for Molecular Biology, 2001
GeneWays: A System for Mining Text and for Integrating Data on Molecular Pathways.
Proceedings of the Computer science and biology: Proceedings of the German Conference on Bioinformatics, 2001
1999
Proceedings of the AMIA 1999, 1999