Hong Yu

According to our database1, Hong Yu authored at least 97 papers between 1999 and 2020.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Bibliography

2020
Neural Data-to-Text Generation with Dynamic Content Planning.
CoRR, 2020

Improved Pretraining for Domain-specific Contextual Embedding Models.
CoRR, 2020

Generating Accurate EHR Assessment from Medical Graph.
Proceedings of the 2020 Conference on Empirical Methods in Natural Language Processing: Findings, 2020

Dynamic Data Selection for Curriculum Learning via Ability Estimation.
Proceedings of the 2020 Conference on Empirical Methods in Natural Language Processing: Findings, 2020

BENTO: A Visual Platform for Building Clinical NLP Pipelines Based on CodaLab.
Proceedings of the 58th Annual Meeting of the Association for Computational Linguistics: System Demonstrations, 2020

Calibrating Structured Output Predictors for Natural Language Processing.
Proceedings of the 58th Annual Meeting of the Association for Computational Linguistics, 2020

ICD Coding from Clinical Text Using Multi-Filter Residual Convolutional Neural Network.
Proceedings of the Thirty-Fourth AAAI Conference on Artificial Intelligence, 2020

2019
Learning to detect and understand drug discontinuation events from clinical narratives.
J. Am. Medical Informatics Assoc., 2019

An investigation of single-domain and multidomain medication and adverse drug event relation extraction from electronic health record notes using advanced deep learning models.
J. Am. Medical Informatics Assoc., 2019

Learning Latent Parameters without Human Response Patterns: Item Response Theory with Artificial Crowds.
CoRR, 2019

A Neural Abstractive Summarization Model Guided with Topic Sentences.
Aust. J. Intell. Inf. Process. Syst., 2019

Clinical Judgement Study using Question Answering from Electronic Health Records.
Proceedings of the Machine Learning for Healthcare Conference, 2019

Naranjo Question Answering using End-to-End Multi-task Learning Model.
Proceedings of the 25th ACM SIGKDD International Conference on Knowledge Discovery & Data Mining, 2019

Generating Classical Chinese Poems from Vernacular Chinese.
Proceedings of the 2019 Conference on Empirical Methods in Natural Language Processing and the 9th International Joint Conference on Natural Language Processing, 2019

Learning Latent Parameters without Human Response Patterns: Item Response Theory with Artificial Crowds.
Proceedings of the 2019 Conference on Empirical Methods in Natural Language Processing and the 9th International Joint Conference on Natural Language Processing, 2019

Bacteria Biotope Relation Extraction via Lexical Chains and Dependency Graphs.
Proceedings of The 5th Workshop on BioNLP Open Shared Tasks, 2019

Extracting Drug-drug Interactions with a Dependency-based Graph Convolution Neural Network.
Proceedings of the 2019 IEEE International Conference on Bioinformatics and Biomedicine, 2019

2018
HYPE: A High Performing NLP System for Automatically Detecting Hypoglycemia Events from Electronic Health Record Notes.
CoRR, 2018

Sentence Simplification with Memory-Augmented Neural Networks.
Proceedings of the 2018 Conference of the North American Chapter of the Association for Computational Linguistics: Human Language Technologies, 2018

Understanding Deep Learning Performance through an Examination of Test Set Difficulty: A Psychometric Case Study.
Proceedings of the 2018 Conference on Empirical Methods in Natural Language Processing, Brussels, Belgium, October 31, 2018

Accuracy of International Classification of Disease Clinical Modification Codes for Detecting Bleeding Events in Electronic Health Records and When to Use Them.
Proceedings of the AMIA 2018, 2018

Reference Standard Development to Train Natural Language Processing Algorithms to Detect Problematic Buprenorphine-Naloxone Therapy.
Proceedings of the AMIA 2018, 2018

Detecting Hypoglycemia Incidents from Patients' Secure Messages.
Proceedings of the AMIA 2018, 2018

2017
Unsupervised ensemble ranking of terms in electronic health record notes based on their importance to patients.
J. Biomed. Informatics, 2017

Improving Machine Learning Ability with Fine-Tuning.
CoRR, 2017

An Analysis of Machine Learning Intelligence.
CoRR, 2017

Meta Networks.
Proceedings of the 34th International Conference on Machine Learning, 2017

Reasoning with Memory Augmented Neural Networks for Language Comprehension.
Proceedings of the 5th International Conference on Learning Representations, 2017

Exploiting PubMed for Protein Molecular Function Prediction via NMF Based Multi-label Classification.
Proceedings of the 2017 IEEE International Conference on Data Mining Workshops, 2017

Neural Semantic Encoders.
Proceedings of the 15th Conference of the European Chapter of the Association for Computational Linguistics, 2017

Neural Tree Indexers for Text Understanding.
Proceedings of the 15th Conference of the European Chapter of the Association for Computational Linguistics, 2017

Assessing Electronic Health Record Readability.
Proceedings of the AMIA 2017, 2017

Detecting Opioid-Related Aberrant Behavior using Natural Language Processing.
Proceedings of the AMIA 2017, 2017

A hybrid Neural Network Model for Joint Prediction of Medical Presence and Period Assertions in Clinical Notes.
Proceedings of the AMIA 2017, 2017

Generating a Test of Electronic Health Record Narrative Comprehension with Item Response Theory.
Proceedings of the AMIA 2017, 2017

2016
Methods for linking EHR notes to education materials.
Inf. Retr. J., 2016

Learning for Biomedical Information Extraction: Methodological Review of Recent Advances.
CoRR, 2016

Learning to Rank Scientific Documents from the Crowd.
CoRR, 2016

Beyond Majority Voting: Generating Evaluation Scales using Item Response Theory.
CoRR, 2016

Bidirectional Recurrent Neural Networks for Medical Event Detection in Electronic Health Records.
CoRR, 2016

Ranking medical jargon in electronic health record notes by adapted distant supervision.
CoRR, 2016

Bidirectional RNN for Medical Event Detection in Electronic Health Records.
Proceedings of the NAACL HLT 2016, 2016

Building an Evaluation Scale using Item Response Theory.
Proceedings of the 2016 Conference on Empirical Methods in Natural Language Processing, 2016

Structured prediction models for RNN based sequence labeling in clinical text.
Proceedings of the 2016 Conference on Empirical Methods in Natural Language Processing, 2016

Citation Analysis with Neural Attention Models.
Proceedings of the Seventh International Workshop on Health Text Mining and Information Analysis, 2016

2015
Key Concept Identification for Medical Information Retrieval.
Proceedings of the 2015 Conference on Empirical Methods in Natural Language Processing, 2015

Rethinking Document Retrieval for Scientific Literature: A Learning to Rank Approach.
Proceedings of the AMIA 2015, 2015

Identifying Key Concepts from EHR Notes Using Domain Adaptation.
Proceedings of the Sixth International Workshop on Health Text Mining and Information Analysis, 2015

Mining and Ranking Biomedical Synonym Candidates from Wikipedia.
Proceedings of the Sixth International Workshop on Health Text Mining and Information Analysis, 2015

2014
Automatically Detecting Acute Myocardial Infarction Events from EHR Text: A Preliminary Study.
Proceedings of the AMIA 2014, 2014

2013
CiteGraph: A Citation Network System for MEDLINE Articles and Analysis.
Proceedings of the MEDINFO 2013, 2013

Improving Patients' Electronic Health Record Comprehension with NoteAid.
Proceedings of the MEDINFO 2013, 2013

Automatically Identifying Health- and Clinical-Related Content in Wikipedia.
Proceedings of the MEDINFO 2013, 2013

2012
Automatic discourse connective detection in biomedical text.
J. Am. Medical Informatics Assoc., 2012

MedTxting: Learning based and Knowledge Rich SMS-style Medical Text Contraction.
Proceedings of the AMIA 2012, 2012

2011
Toward automated consumer question answering: Automatically separating consumer questions from professional questions in the healthcare domain.
J. Biomed. Informatics, 2011

Automatic figure classification in bioscience literature.
J. Biomed. Informatics, 2011

AskHERMES: An online question answering system for complex clinical questions.
J. Biomed. Informatics, 2011

Towards spoken clinical-question answering: evaluating and adapting automatic speech-recognition systems for spoken clinical questions.
J. Am. Medical Informatics Assoc., 2011

Parsing citations in biomedical articles using conditional random fields.
Comput. Biol. Medicine, 2011

The Biomedical Discourse Relation Bank.
BMC Bioinform., 2011

BioNOT: A searchable database of biomedical negated sentences.
BMC Bioinform., 2011

Simple and efficient machine learning frameworks for identifying protein-protein interaction relevant articles and experimental methods used to study the interactions.
BMC Bioinform., 2011

Figure summarizer browser extensions for PubMed Central.
Bioinform., 2011

2010
An IR-Aided Machine Learning Framework for the BioCreative II.5 Challenge.
IEEE ACM Trans. Comput. Biol. Bioinform., 2010

Automatically extracting information needs from complex clinical questions.
J. Biomed. Informatics, 2010

Detecting hedge cues and their scope in biomedical text with conditional random fields.
J. Biomed. Informatics, 2010

Lancet: a high precision medication event extraction system for clinical text.
J. Am. Medical Informatics Assoc., 2010

Biomedical negation scope detection with conditional random fields.
J. Am. Medical Informatics Assoc., 2010

2009
Automatically classifying sentences in full-text biomedical articles into Introduction, Methods, Results and Discussion.
Bioinform., 2009

Evaluation of the Clinical Question Answering Presentation.
Proceedings of the BioNLP Workshop, BioNLP@HLT-NAACL 2009, 2009

Hierarchical Image Classification in the Bioscience Literature.
Proceedings of the AMIA 2009, 2009

FigSum: Automatically Generating Structured Text Summaries for Figures in Biomedical Literature.
Proceedings of the AMIA 2009, 2009

2008
A Pilot Annotation to Investigate Discourse Connectivity in Biomedical Text.
Proceedings of the Workshop on Current Trends in Biomedical Natural Language Processing, 2008

Automatically Extracting Information Needs from Ad Hoc Clinical Questions.
Proceedings of the AMIA 2008, 2008

2007
Development, implementation, and a cognitive evaluation of a definitional question answering system for physicians.
J. Biomed. Informatics, 2007

Using MEDLINE as a knowledge source for disambiguating abbreviations and acronyms in full-text biomedical journal articles.
J. Biomed. Informatics, 2007

Natural language processing and visualization in the molecular imaging domain.
J. Biomed. Informatics, 2007

Frontiers of biomedical text mining: current progress.
Briefings Bioinform., 2007

Session Introduction.
Proceedings of the Biocomputing 2007, 2007

2006
A large scale, corpus-based approach for automatically disambiguating biomedical abbreviations.
ACM Trans. Inf. Syst., 2006

Exploring supervised and unsupervised methods to detect topics in biomedical text.
BMC Bioinform., 2006

BioEx: A Novel User-Interface that Accesses Images from Abstract Sentences.
Proceedings of the Human Language Technology Conference of the North American Chapter of the Association of Computational Linguistics, 2006

Accessing bioscience images from abstract sentences.
Proceedings of the Proceedings 14th International Conference on Intelligent Systems for Molecular Biology 2006, 2006

Exploring Text and Image Features to Classify Images in Bioscience Literature.
Proceedings of the Workshop on Linking Natural Language and Biology, 2006

Beyond Information Retrieval - Medical Question Answering.
Proceedings of the AMIA 2006, 2006

Extracting Opinion Propositions and Opinion Holders using Syntactic and Lexical Cues.
Proceedings of the Computing Attitude and Affect in Text: Theory and Applications, 2006

2005
Question Analysis for Biomedical Question Answering.
Proceedings of the AMIA 2005, 2005

2004
GeneWays: a system for extracting, analyzing, visualizing, and integrating molecular pathway data.
J. Biomed. Informatics, 2004

Using MEDLINE as a Knowledge Source for Disambiguating Abbreviations in Full-Text Biomedical Journal Articles.
Proceedings of the 17th IEEE Symposium on Computer-Based Medical Systems (CBMS 2004), 2004

2002
Automatically identifying gene/protein terms in MEDLINE abstracts.
J. Biomed. Informatics, 2002

Research Paper: Mapping Abbreviations to Full Forms in Biomedical Articles.
J. Am. Medical Informatics Assoc., 2002


Automatic extraction of gene and protein synonyms from MEDLINE and journal articles.
Proceedings of the AMIA 2002, 2002

2001
GENIES: a natural-language processing system for the extraction of molecular pathways from journal articles.
Proceedings of the Ninth International Conference on Intelligent Systems for Molecular Biology, 2001

GeneWays: A System for Mining Text and for Integrating Data on Molecular Pathways.
Proceedings of the Computer science and biology: Proceedings of the German Conference on Bioinformatics, 2001

1999
Representing genomic knowledge in the UMLS semantic network.
Proceedings of the AMIA 1999, 1999


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