Exploiting Unlabeled Data for Improving Accuracy of Predictive Data Mining. - Kang Peng; Slobodan Vucetic; Bo Han; Hongbo M. Xie; Zoran Obradovic (ICDM, 2003)

Detection of Underrepresented Biological Sequences using Class-Conditional Distribution Models. - Slobodan Vucetic; Dragoljub Pokrajac; Hongbo M. Xie; Zoran Obradovic (SDM, 2003)

Analysis of multiplex gene expression maps obtained by voxelation. - Li An; Hongbo M. Xie; Mark H. Chin; Zoran Obradovic; Desmond J. Smith; Vasileios Megalooikonomou (BMC Bioinform., 2009)

Identifying gene functions using functional expression profiles obtained by voxelation. - Li An; Desmond J. Smith; Hongbo M. Xie; Vasileios Megalooikonomou; Zoran Obradovic (BCB, 2010)

CNV Workshop: an integrated platform for high-throughput copy number variation discovery and clinical diagnostics. - Xiaowu Gai; Juan C. Perin; Kevin Murphy 005; Ryan O'Hara; Monica D'arcy; Adam Wenocur; Hongbo M. Xie; Eric F. Rappaport; Tamim H. Shaikh; Peter S. White (BMC Bioinform., 2010)

Mitochondrial Genome Sequence Analysis: A custom bioinformatics pipeline substantially improves Affymetrix MitoChip v2.0 call rate and accuracy. - Hongbo M. Xie; Juan C. Perin; Theodore G. Schurr; Matthew C. Dulik; Sergey I. Zhadanov; Joseph A. Baur; Michael P. King; Emily Place; Colleen Clarke; Michael Grauer; Jonathan Schug; Avni Santani; et al. (BMC Bioinform., 2011)

Efficient digest of high-throughput sequencing data in a reproducible report. - Zhe Zhang; Jeremy Leipzig; Ariella Sasson; Angela M. Yu; Juan C. Perin; Hongbo M. Xie; Mahdi Sarmady; Patrick V. Warren; Peter S. White (BMC Bioinform., 2013)