IM.Grid, a Grid computing approach for Image Mining of High Throughput-High Content Screening. - HongKee Moon; Auguste Genovesio (GRID, 2008)

PlanMine - a mineable resource of planarian biology and biodiversity. - Holger Brandl; HongKee Moon; Miquel Vila-Farré; Shang-Yun Liu; Ian Henry; Jochen C. Rink (Nucleic Acids Res., 2016)

PlanMine 3.0 - improvements to a mineable resource of flatworm biology and biodiversity. - Andrei Rozanski; HongKee Moon; Holger Brandl; José M. Martín-Durán; Markus A. Grohme; Katja Hüttner; Kerstin Bartscherer; Ian Henry; Jochen C. Rink (Nucleic Acids Res., 2019)

deTELpy: Python package for high-throughput detection of amino acid substitutions in mass spectrometry datasets. - Cedric Landerer; Maxim Scheremetjew; HongKee Moon; Lena Hersemann; Ágnes Tóth-Petróczy (Bioinform., 2024)