Active Learning Based Corpus Annotation. - Hongyan Song; Tianfang Yao; Chunyu Kit; Dongfeng Cai (CIPS-SIGHAN, 2010)

A testing framework for DEVS formalism implementations. - Xiaobo Li 003; Hans Vangheluwe; Yonglin Lei; Hongyan Song; Weiping Wang 002 (SpringSim (TMS-DEVS), 2011)

PhyloPro: a web-based tool for the generation and visualization of phylogenetic profiles across Eukarya. - Xuejian Xiong; Hongyan Song; Tuan On; Lucas Lochovsky; Nicholas J. Provart; John Parkinson (Bioinform., 2011)

Modelling the Self-Assembly of Elastomeric Proteins Provides Insights into the Evolution of Their Domain Architectures. - Hongyan Song; John Parkinson (PLoS Comput. Biol., 2012)

PhyloPro2.0: a database for the dynamic exploration of phylogenetically conserved proteins and their domain architectures across the Eukarya. - Graham L. Cromar; Anthony Zhao; Xuejian Xiong; Lakshmipuram S. Swapna; Noeleen Loughran; Hongyan Song; John Parkinson (Database J. Biol. Databases Curation, 2016)

Fine-grained Construction of Semantic Technology Network for Technology Evolution Analysis. - Xiaoman Li; Hongyan Song; Xuefu Zhang; Qian Xu (CSAE, 2019)

The landscape of different molecular modules in an immune microenvironment during tuberculosis infection. - Nan Zhang; Xizi Luo; Juanjuan Huang; Hongyan Song; Xinyue Zhang; Honglan Huang; Shishun Zhao; Guoqing Wang (Briefings Bioinform., 2021)