A New Multi-objective Particle Swarm Optimization Based on Linear Decreasing Velocity Update Mechanism. - Yanmin Liu; Lian Yuan; Aijia Ouyang; Hongyan Ye; Rui Leng; Tao Huang 018 (ICIC (1), 2019)

Drug-target and Drug-disease Association Prediction based on Drug-target-disease Network and Multi-task Learning. - Binyu Wang; Yunhao Zhang; Hongyan Ye; Lianlian Wu; Song He; Xiaochen Bo; Zhongnan Zhang (BIBM, 2023)

HSGCL-DTA: Hybrid-scale Graph Contrastive Learning based Drug-Target Binding Affinity Prediction. - Hongyan Ye; Yingying Song; Binyu Wang; Lianlian Wu; Song He; Xiaochen Bo; Zhongnan Zhang (ICTAI, 2023)