BAMSE: Bayesian model selection for tumor phylogeny inference among multiple tumor samples. - Hosein Toosi; Ali Moeini; Iman Hajirasouliha (ICCABS, 2017)

BAMSE: Bayesian model selection for tumor phylogeny inference among multiple samples. - Hosein Toosi; Ali Moeini; Iman Hajirasouliha (BMC Bioinform., 2019)

CopyMix: Mixture model based single-cell clustering and copy number profiling using variational inference. - Negar Safinianaini; Camila P. E. de Souza; Andrew Roth; Hazal Koptagel; Hosein Toosi; Jens Lagergren (Comput. Biol. Chem., 2024)