DBCAT: Database of CpG Islands and Analytical Tools for Identifying Comprehensive Methylation Profiles in Cancer Cells. - Hsien-Chi Kuo; Po-Yu Lin; Ting-Chiun Chung; Chin-Mei Chao; Liang-Chuan Lai; Mong-Hsun Tsai; Eric Y. Chuang (J. Comput. Biol., 2011)

Level Set Breast Mass Segmentation in Contrast-Enhanced and Non-Contrast-Enhanced Breast CT. - Hsien-Chi Kuo; Maryellen L. Giger; Ingrid S. Reiser; John M. Boone; Karen K. Lindfors; Kai Yang; Alexandra Edwards (Digital Mammography / IWDM, 2012)

Automatic 3D lesion segmentation on breast ultrasound images. - Hsien-Chi Kuo; Maryellen L. Giger; Ingrid S. Reiser; Karen Drukker; Alexandra Edwards; Charlene A. Sennett (Computer-Aided Diagnosis, 2013)

Level Set Segmentation of Breast Masses in Contrast-Enhanced Dedicated Breast CT and Evaluation of Stopping Criteria. - Hsien-Chi Kuo; Maryellen L. Giger; Ingrid S. Reiser; John M. Boone; Karen K. Lindfors; Kai Yang; Alexandra Edwards (J. Digit. Imaging, 2014)

Design of an Innovative Assisting Device for Knee Osteoarthritis. - Fong-Gong Wu; Hsien-Chi Kuo (HCI (9), 2017)

DeepNeuron: an open deep learning toolbox for neuron tracing. - Zhi Zhou 006; Hsien-Chi Kuo; Hanchuan Peng; Fuhui Long (Brain Informatics, 2018)