Primer e-PCR: Provide Sequences between Primers. - Yu-Huei Cheng; Cheng-Hao Wen; Hsueh-Wei Chang; Li-Yeh Chuang; Cheng-Hong Yang 001 (IMECS, 2006)

SNPrimer- Design of Natural and Degenerated Primers for SNPs. - Cheng-Hao Wen; Yu-Huei Cheng; Hsueh-Wei Chang; Li-Yeh Chuang; Cheng-Hong Yang 001 (IMECS, 2006)

A Novel Feature Selection for Gene Expression Data. - Cheng-Hong Yang 001; Li-Yeh Chuang; Chung-Jui Tu; Hsueh-Wei Chang (JCIS, 2006)

V-MitoSNP: visualization of human mitochondrial SNPs. - Li-Yeh Chuang; Cheng-Hong Yang 001; Yu-Huei Cheng; De-Leung Gu; Phei-Lang Chang; Ke-Hung Tsui; Hsueh-Wei Chang (BMC Bioinform., 2006)

A Novel Method Providing Exact SNP IDs from Sequences. - Yu-Huei Cheng; Cheng-San Yang; Hsueh-Wei Chang; Li-Yeh Chuang; Cheng-Hong Yang 001 (IMECS, 2007)

Primer Design Using PSO Algorithm. - Ming-Hsien Lin; Yu-Huei Cheng; Cheng-San Yang; Hsueh-Wei Chang; Li-Yeh Chuang; Cheng-Hong Yang 001 (IMECS, 2007)

Improved binary PSO for feature selection using gene expression data. - Li-Yeh Chuang; Hsueh-Wei Chang; Chung-Jui Tu; Cheng-Hong Yang 001 (Comput. Biol. Chem., 2008)

Genetic Algorithm for the Design of Confronting Two-Pair Primers. - Cheng-Hong Yang 001; Yu-Huei Cheng; Li-Yeh Chuang; Hsueh-Wei Chang (BIBE, 2009)

Fuzzy adaptive particle swarm optimization for a specific primer design problem. - Cheng-Hong Yang 001; Yu-Huei Cheng; Hsueh-Wei Chang; Li-Yeh Chuang (FUZZ-IEEE, 2009)

Generating SNP barcode to evaluate SNP-SNP interaction of disease by particle swarm optimization. - Hsueh-Wei Chang; Cheng-Hong Yang 001; Chang-Hsuan Ho; Cheng-Hao Wen; Li-Yeh Chuang (Comput. Biol. Chem., 2009)

A mismatch PCR-RFLP primer design for SNP genotyping using genetic algorithm. - Cheng-Hong Yang 001; Yu-Huei Cheng; Li-Yeh Chuang; Hsueh-Wei Chang (IEEE ICCI, 2010)

SNP-RFLPing 2: an updated and integrated PCR-RFLP tool for SNP genotyping. - Hsueh-Wei Chang; Yu-Huei Cheng; Li-Yeh Chuang; Cheng-Hong Yang 001 (BMC Bioinform., 2010)

Confronting two-pair primer design for enzyme-free SNP genotyping based on a genetic algorithm. - Cheng-Hong Yang 001; Yu-Huei Cheng; Li-Yeh Chuang; Hsueh-Wei Chang (BMC Bioinform., 2010)

An Improved Natural PCR-RFLP Primer Design Method. - Li-Yeh Chuang; Yu-Da Lin; Hsueh-Wei Chang; Cheng-Hong Yang 001 (BIBE, 2011)

Analysis of SNP Interaction Combinations to Determine Breast Cancer Risk with PSO. - Li-Yeh Chuang; Ming-Cheng Lin; Hsueh-Wei Chang; Cheng-Hong Yang 001 (BIBE, 2011)

Odds Ratio-Based Genetic Algorithm for Prediction of SNP-SNP Interactions in Breast Cancer Association Study. - Li-Yeh Chuang; Ming-Cheng Lin; Hsueh-Wei Chang; Cheng-Hong Yang 001 (AINA Workshops, 2012)

PCR-RFLP Primer Design Using Particle Swarm Optimization Combined with Chaotic Logistic Map. - Li-Yeh Chuang; Yu-Da Lin; Hsueh-Wei Chang; Cheng-Hong Yang 001 (AINA Workshops, 2012)

Drug-SNPing: an integrated drug-based, protein interaction-based tagSNP-based pharmacogenomics platform for SNP genotyping. - Cheng-Hong Yang 001; Yu-Huei Cheng; Li-Yeh Chuang; Hsueh-Wei Chang (Bioinform., 2013)

Improved branch and bound algorithm for detecting SNP-SNP interactions in breast cancer. - Li-Yeh Chuang; Hsueh-Wei Chang; Ming-Cheng Lin; Cheng-Hong Yang 001 (J. Clin. Bioinform., 2013)

Evaluation of Breast Cancer Susceptibility Using Improved Genetic Algorithms to Generate Genotype SNP Barcodes. - Cheng-Hong Yang 001; Yu-Da Lin; Li-Yeh Chuang; Hsueh-Wei Chang (IEEE ACM Trans. Comput. Biol. Bioinform., 2013)

SNP-SNP Interaction Using Gauss Chaotic Map Particle Swarm Optimization to Detect Susceptibility to Breast Cancer. - Li-Yeh Chuang; Yu-Da Lin; Hsueh-Wei Chang; Cheng-Hong Yang 001 (HICSS, 2014)

Analysis of high-order SNP barcodes in mitochondrial D-loop for chronic dialysis susceptibility. - Cheng-Hong Yang 001; Yu-Da Lin; Li-Yeh Chuang; Hsueh-Wei Chang (J. Biomed. Informatics, 2016)

A Particle Swarm Optimization-Based Approach with Local Search for Predicting Protein Folding. - Cheng-Hong Yang 001; Yu-Shiun Lin; Li-Yeh Chuang; Hsueh-Wei Chang (J. Comput. Biol., 2017)

Joint Analysis of SNP-SNP-Environment Interactions for Chronic Dialysis by an Improved Branch and Bound Algorithm. - Cheng-Hong Yang 001; Yu-Da Lin; Li-Yeh Chuang; Jin-Bor Chen; Hsueh-Wei Chang (J. Comput. Biol., 2017)

Decision Theory-Based DNA Barcoding Through Quick Response Code Representation. - Cheng-Hong Yang 001; Kuo-Chuan Wu; Hsueh-Wei Chang; Li-Yeh Chuang (BIBE, 2018)

Protein folding prediction in the HP model using ions motion optimization with a greedy algorithm. - Cheng-Hong Yang 001; Kuo-Chuan Wu; Yu-Shiun Lin; Li-Yeh Chuang; Hsueh-Wei Chang (BioData Min., 2018)

DeepBarcoding: Deep Learning for Species Classification Using DNA Barcoding. - Cheng-Hong Yang 001; Kuo-Chuan Wu; Li-Yeh Chuang; Hsueh-Wei Chang (IEEE ACM Trans. Comput. Biol. Bioinform., 2022)