AttentionGRN: a functional and directed graph transformer for gene regulatory network reconstruction from scRNA-seq data. - Zhen Gao; Yansen Su; Jin Tang 001; Huaiwan Jin; Yun Ding; Rui-Fen Cao; Pi-Jing Wei; Chun-Hou Zheng 001 (Briefings Bioinform., 2025)

GAEDGRN: reconstruction of gene regulatory networks based on gravity-inspired graph autoencoders. - Pi-Jing Wei; Huaiwan Jin; Zhen Gao; Yansen Su; Chun-Hou Zheng 001 (Briefings Bioinform., 2025)