SENet: A deep learning framework for discriminating super- and typical enhancers by sequence information. - Hanyu Luo; Ye Li; Huan Liu 027; Pingjian Ding; Ying Yu; Lingyun Luo (Comput. Biol. Chem., 2023)

Self-prediction of relations in GO facilitates its quality auditing. - Cheng Chen; Lingyun Luo; Chunlei Zheng; Pingjian Ding; Huan Liu 027; Hanyu Luo (J. Biomed. Informatics, 2023)

Multi-scale DNA language model improves 6 mA binding sites prediction. - Anlin Hou; Hanyu Luo; Huan Liu 027; Lingyun Luo; Pingjian Ding (Comput. Biol. Chem., 2024)

FCGR-Enhancer: A Lightweight Multi-scale CNN Model for Super-Enhancer Identification via Chaos Game Representation. - Huan Liu 027; Yidong He; Lingyun Luo; Pingjian Ding (ICIC (27), 2025)