A distributed CPU-GPU framework for pairwise alignments on large-scale sequence datasets. - Da Li 002; Kittisak Sajjapongse; Huan Truong; Gavin C. Conant; Michela Becchi (ASAP, 2013)

Large-Scale Pairwise Alignments on GPU Clusters: Exploring the Implementation Space. - Huan Truong; Da Li 002; Kittisak Sajjapongse; Gavin C. Conant; Michela Becchi (J. Signal Process. Syst., 2014)

Parallel Gene Upstream Comparison via Multi-Level Hash Tables on GPU. - Andrew Todd; Huan Truong; Justin Deters; John Long; Gavin C. Conant; Michela Becchi (ICPADS, 2016)