Java editor for biological pathways. - Elmar Trost; Hubert Hackl; Michael Maurer; Zlatko Trajanoski (Bioinform., 2003)

ArrayNorm: comprehensive normalization and analysis of microarray data. - Roland Pieler; Fátima Sánchez-Cabo; Hubert Hackl; Gerhard G. Thallinger; Zlatko Trajanoski (Bioinform., 2004)

MARS: Microarray analysis, retrieval, and storage system. - Michael Maurer; Robert Molidor; Alexander Sturn; Jürgen Hartler; Hubert Hackl; Gernot Stocker; Andreas Prokesch; Marcel Scheideler; Zlatko Trajanoski (BMC Bioinform., 2005)

PathwayExplorer: web service for visualizing high-throughput expression data on biological pathways. - Bernhard Mlecnik; Marcel Scheideler; Hubert Hackl; Jürgen Hartler; Fátima Sánchez-Cabo; Zlatko Trajanoski (Nucleic Acids Res., 2005)

ClueGO: a Cytoscape plug-in to decipher functionally grouped gene ontology and pathway annotation networks. - Gabriela Bindea; Bernhard Mlecnik; Hubert Hackl; Pornpimol Charoentong; Marie Tosolini; Amos Kirilovsky; Wolf-Herman Fridman; Franck Pagès; Zlatko Trajanoski; Jérôme Galon (Bioinform., 2009)

GPViz: dynamic visualization of genomic regions and variants affecting protein domains. - René Snajder; Zlatko Trajanoski; Hubert Hackl (Bioinform., 2013)

Mathematical models for translational and clinical oncology. - Ralf Gallasch; Mirjana Efremova; Pornpimol Charoentong; Hubert Hackl; Zlatko Trajanoski (J. Clin. Bioinform., 2013)

MIO: microRNA target analysis system for immuno-oncology. - Pablo Monfort-Lanzas; Raphael Gronauer; Leonie Madersbacher; Christoph Schatz; Dietmar Rieder; Hubert Hackl (Bioinform., 2022)

Adaptive Image Compression via Optimal Mesh Refinement. - Michael Feischl; Hubert Hackl (Comput. Methods Appl. Math., 2024)