Characterizing Self-developing Biological Neural Networks: A First Step Towards Their Application to Computing Systems. - Hugues Berry; Olivier Temam (IWANN, 2005)

Chaos in computer performance - Hugues Berry; Daniel Gracia Pérez; Olivier Temam (CoRR, 2005)

Structure and Dynamics of Random Recurrent Neural Networks. - Hugues Berry; Mathias Quoy (Adapt. Behav., 2006)

A Sampling Method Focusing on Practicality. - Daniel Gracia Pérez; Hugues Berry; Olivier Temam (IEEE Micro, 2006)

Optimising the topology of complex neural networks - Fei Jiang; Hugues Berry; Marc Schoenauer (CoRR, 2007)

Modeling self-developing biological neural networks. - Hugues Berry; Olivier Temam (Neurocomputing, 2007)

A New Principle for Information Storage in an Enzymatic Pathway Model. - Bruno Delord; Hugues Berry; Emmanuel Guigon; Stéphane Genet (PLoS Comput. Biol., 2007)

Unsupervised learning of echo state networks: balancing the double pole. - Fei Jiang; Hugues Berry; Marc Schoenauer (GECCO, 2008)

Supervised and Evolutionary Learning of Echo State Networks. - Fei Jiang; Hugues Berry; Marc Schoenauer (PPSN, 2008)

A Mathematical Analysis of the Effects of Hebbian Learning Rules on the Dynamics and Structure of Discrete-Time Random Recurrent Neural Networks. - Benoît Siri; Hugues Berry; Bruno Cessac; Bruno Delord; Mathias Quoy (Neural Comput., 2008)

The impact of network topology on self-organizing maps. - Fei Jiang; Hugues Berry; Marc Schoenauer (GEC Summit, 2009)

Reconciling specialization and flexibility through compound circuits. - Sami Yehia; Sylvain Girbal; Hugues Berry; Olivier Temam (HPCA, 2009)

Robustness of the Critical Behaviour in a Discrete Stochastic Reaction-Diffusion Medium. - Nazim Fatès; Hugues Berry (IWNC, 2009)

A memory interface for multi-purpose multi-stream accelerators. - Sylvain Girbal; Olivier Temam; Sami Yehia; Hugues Berry; Zheng Li (CASES, 2010)

An FPGA design for the stochastic Greenberg-Hastings cellular automata. - Nikolaos Vlassopoulos; Nazim Fatès; Hugues Berry; Bernard Girau (HPCS, 2010)

CMA: Chip multi-accelerator. - Dominik Auras; Sylvain Girbal; Hugues Berry; Olivier Temam; Sami Yehia (SASP, 2010)

Nonlinear Gap Junctions Enable Long-Distance Propagation of Pulsating Calcium Waves in Astrocyte Networks. - Mati Goldberg; Maurizio De Pittà; Vladislav Volman; Hugues Berry; Eshel Ben-Jacob (PLoS Comput. Biol., 2010)

Automatic abstraction and fault tolerance in cortical microachitectures. - Atif Hashmi; Hugues Berry; Olivier Temam; Mikko H. Lipasti (ISCA, 2011)

Robustness of the Critical Behaviour in the Stochastic Greenberg-Hastings Cellular Automaton Model - Hugues Berry; Nazim Fatès (Int. J. Unconv. Comput., 2011)

A Tale of Two Stories: Astrocyte Regulation of Synaptic Depression and Facilitation. - Maurizio De Pittà; Vladislav Volman; Hugues Berry; Eshel Ben-Jacob (PLoS Comput. Biol., 2011)

Computational quest for understanding the role of astrocyte signaling in synaptic transmission and plasticity. - Maurizio De Pittà; Vladislav Volman; Hugues Berry; Vladimir Parpura; Andrea Volterra; Eshel Ben-Jacob (Frontiers Comput. Neurosci., 2012)

Large-scale Simulations on FPGAs: Finding the Asymptotic Critical Threshold of the Greenberg-Hastings Cellular Automata. - Nikolaos Vlassopoulos; Nazim Fatès; Hugues Berry; Bernard Girau (J. Cell. Autom., 2012)

A Theory of Rate Coding Control by Intrinsic Plasticity Effects. - J. Naudé; J. T. Paz; Hugues Berry; Bruno Delord (PLoS Comput. Biol., 2012)

Localization of protein aggregation in Escherichia coli is governed by diffusion and nucleoid macromolecular crowding effect - Anne-Sophie Coquel; Jean-Pascal Jacob; Maël Primet; Alice Demarez; Mariella Dimiccoli; Thomas Julou; Lionel Moisan; Ariel B. Lindner; Hugues Berry (CoRR, 2013)

Localization of Protein Aggregation in Escherichia coli Is Governed by Diffusion and Nucleoid Macromolecular Crowding Effect. - Anne-Sophie Coquel; Jean-Pascal Jacob; Maël Primet; Alice Demarez; Mariella Dimiccoli; Thomas Julou; Lionel Moisan; Ariel B. Lindner; Hugues Berry (PLoS Comput. Biol., 2013)

Sparse short-distance connections enhance calcium wave propagation in a 3D model of astrocyte networks. - Jules Lallouette; Maurizio De Pittà; Eshel Ben-Jacob; Hugues Berry (Frontiers Comput. Neurosci., 2014)

Glutamate Mediated Astrocytic Filtering of Neuronal Activity. - Gilad Wallach; Jules Lallouette; Nitzan Herzog; Maurizio De Pittà; Eshel Ben-Jacob; Hugues Berry; Yael Hanein (PLoS Comput. Biol., 2014)

Modulation of Spike-Timing Dependent Plasticity: Towards the Inclusion of a Third Factor in Computational Models. - Alexandre Foncelle; Alexandre Mendes; Joanna Jedrzejewska-Szmek; Silvana Valtcheva; Hugues Berry; Kim T. Blackwell; Laurent Venance (Frontiers Comput. Neurosci., 2018)

A Computational Model of Interactions Between Neuronal and Astrocytic Networks: The Role of Astrocytes in the Stability of the Neuronal Firing Rate. - Kerstin Lenk; Eero Satuvuori; Jules Lallouette; Antonio Ladrón-de-Guevara; Hugues Berry; Jari A. K. Hyttinen (Frontiers Comput. Neurosci., 2019)

Simulation of calcium signaling in fine astrocytic processes: Effect of spatial properties on spontaneous activity. - Audrey Denizot; Misa Arizono; U. Valentin Nägerl; Hédi Soula; Hugues Berry (PLoS Comput. Biol., 2019)

Interdisciplinary Research in Artificial Intelligence: Challenges and Opportunities. - Remy Kusters; Dusan Misevic; Hugues Berry; Antoine Cully; Yann Le Cunff; Loic Dandoy; Natalia Díaz Rodríguez; Marion Ficher; Jonathan Grizou; Alice Othmani; Themis Palpanas; Matthieu Komorowski; et al. (Frontiers Big Data, 2020)

Simulation of Astrocytic Calcium Dynamics in Lattice Light Sheet Microscopy Images. - Anaïs Badoual; Misa Arizono; Audrey Denizot; Mathieu Ducros; Hugues Berry; U. Valentin Nägerl; Charles Kervrann (ISBI, 2021)

Stochastic Spatially-Extended Simulations Predict the Effect of ER Distribution on Astrocytic Microdomain Ca2+ Activity. - Audrey Denizot; Corrado Calì; Hugues Berry; Erik De Schutter (NANOCOM, 2021)

Modelling the modulation of cortical Up-Down state switching by astrocytes. - Lisa Blum Moyse; Hugues Berry (PLoS Comput. Biol., 2022)

Vascular segmentation of functional ultrasound images using deep learning. - Hana Sebia; Thomas Guyet; Mickaël Pereira; Marcos A. Valdebenito; Hugues Berry; Benjamin Vidal (Comput. Biol. Medicine, 2025)

Evaluating PDE discovery methods for multiscale modeling of biological signals. - Andréa Ducos; Audrey Denizot; Thomas Guyet; Hugues Berry (CoRR, 2025)