ASDB: a resource for probing protein functions with small molecules. - Zhihong Liu; Peng Ding 004; Xin Yan 006; Minghao Zheng; Huihao Zhou; Yuehua Xu; Yunfei Du; Qiong Gu; Jun Xu 017 (Bioinform., 2016)

PTS: a pharmaceutical target seeker. - Peng Ding 004; Xin Yan 006; Zhihong Liu; Jiewen Du; Yunfei Du; Yutong Lu; Di Wu 001; Yuehua Xu; Huihao Zhou; Qiong Gu; Jun Xu 017 (Database J. Biol. Databases Curation, 2017)

TCMAnalyzer: A Chemo- and Bioinformatics Web Service for Analyzing Traditional Chinese Medicine. - Zhihong Liu; Jiewen Du; Xin Yan 006; Jiali Zhong; Lu Cui; Jinyuan Lin; Lizhu Zeng; Peng Ding 004; Pin Chen; Xinxin Zhou; Huihao Zhou; Qiong Gu; et al. (J. Chem. Inf. Model., 2018)

Structurally Selective Mechanism of Liver X Receptor Ligand: In Silico and In Vitro Studies. - Peng Ding 004; Ziyang Chen; Hao Chen; Zizhen Zhang; Zhihong Liu; Xin Yan 006; Huihao Zhou; Qiong Gu; Chanjuan Li; Jun Xu 017 (J. Chem. Inf. Model., 2019)

DeepChemStable: Chemical Stability Prediction with an Attention-Based Graph Convolution Network. - Xiuming Li; Xin Yan 006; Qiong Gu; Huihao Zhou; Di Wu 001; Jun Xu 017 (J. Chem. Inf. Model., 2019)

dMXP: A De Novo Small-Molecule 3D Structure Predictor with Graph Attention Networks. - Haopeng Ai; Deyin Wu; Huihao Zhou; Jun Xu 017; Qiong Gu (J. Chem. Inf. Model., 2024)

A 3D pocket-aware and evolutionary conserved interaction guided diffusion model for molecular optimization. - Anjie Qiao; Hao Zhang; Qianmu Yuan; Qirui Deng; Jingtian Su; Weifeng Huang; Huihao Zhou; Guo-Bo Li; Zhen Wang; Jinping Lei (CoRR, 2025)