UNet 3+: A Full-Scale Connected UNet for Medical Image Segmentation. - Huimin Huang 002; Lanfen Lin; Ruofeng Tong 001; Hongjie Hu; Qiaowei Zhang; Yutaro Iwamoto; Xianhua Han; Yen-Wei Chen 001; Jian Wu (ICASSP, 2020)

WNET: An End-to-End Atlas-Guided and Boundary-Enhanced Network for Medical Image Segmentation. - Huimin Huang 002; Lanfen Lin; Ruofeng Tong 001; Hongjie Hu; Qiaowei Zhang; Yutaro Iwamoto; Xianhua Han; Yen-Wei Chen 001; Jian Wu (ISBI, 2020)

Graph-Based Pyramid Global Context Reasoning With a Saliency- Aware Projection for Covid-19 Lung Infections Segmentation. - Huimin Huang 002; Ming Cai; Lanfen Lin; Jing Zheng; Xiongwei Mao; Xiaohan Qian; Zhiyi Peng; Jianying Zhou 006; Yutaro Iwamoto; Xian-Hua Han; Yen-Wei Chen 001; Ruofeng Tong 001 (ICASSP, 2021)

Graph-BAS3Net: Boundary-Aware Semi-Supervised Segmentation Network with Bilateral Graph Convolution. - Huimin Huang 002; Lanfen Lin; Yue Zhang 042; Yingying Xu; Jing Zheng; Xiongwei Mao; Xiaohan Qian; Zhiyi Peng; Jianying Zhou 006; Yen-Wei Chen 001; Ruofeng Tong 001 (ICCV, 2021)

3D Graph-S2Net: Shape-Aware Self-ensembling Network for Semi-supervised Segmentation with Bilateral Graph Convolution. - Huimin Huang 002; Nan Zhou; Lanfen Lin; Hongjie Hu; Yutaro Iwamoto; Xian-Hua Han; Yen-Wei Chen 001; Ruofeng Tong 001 (MICCAI (2), 2021)

Multi-phase Liver Tumor Segmentation with Spatial Aggregation and Uncertain Region Inpainting. - Yue Zhang 042; Chengtao Peng; Liying Peng; Huimin Huang 002; Ruofeng Tong 001; Lanfen Lin; Jingsong Li 001; Yen-Wei Chen 001; Qingqing Chen 001; Hongjie Hu; Zhiyi Peng (MICCAI (1), 2021)

Medical Image Segmentation With Deep Atlas Prior. - Huimin Huang 002; Han Zheng; Lanfen Lin; Ming Cai; Hongjie Hu; Qiaowei Zhang; Qingqing Chen 001; Yutaro Iwamoto; Xianhua Han; Yen-Wei Chen 001; Ruofeng Tong 001 (IEEE Trans. Medical Imaging, 2021)

ScaleFormer: Revisiting the Transformer-based Backbones from a Scale-wise Perspective for Medical Image Segmentation. - Huimin Huang 002; Shiao Xie; Lanfen Lin; Yutaro Iwamoto; Xian-Hua Han; Yen-Wei Chen 001; Ruofeng Tong 001 (IJCAI, 2022)

MTL-ABS3Net: Atlas-Based Semi-Supervised Organ Segmentation Network With Multi-Task Learning for Medical Images. - Huimin Huang 002; Qingqing Chen 001; Lanfen Lin; Ming Cai; Qiaowei Zhang; Yutaro Iwamoto; Xianhua Han; Akira Furukawa; Shuzo Kanasaki; Yen-Wei Chen 001; Ruofeng Tong 001; Hongjie Hu (IEEE J. Biomed. Health Informatics, 2022)

ClassFormer: Exploring Class-Aware Dependency with Transformer for Medical Image Segmentation. - Huimin Huang 002; Shiao Xie; Lanfen Lin; Ruofeng Tong 001; Yen-Wei Chen 001; Hong Wang 021; Yuexiang Li; Yawen Huang; Yefeng Zheng 001 (AAAI, 2023)

SemiCVT: Semi-Supervised Convolutional Vision Transformer for Semantic Segmentation. - Huimin Huang 002; Shiao Xie; Lanfen Lin; Ruofeng Tong 001; Yen-Wei Chen 001; Yuexiang Li; Hong Wang 021; Yawen Huang; Yefeng Zheng 001 (CVPR, 2023)

MedFCT: A Frequency Domain Joint CNN-Transformer Network for Semi-supervised Medical Image Segmentation. - Shiao Xie; Huimin Huang 002; Ziwei Niu; Lanfen Lin; Yen-Wei Chen 001 (ICME, 2023)

Semi-Supervised Convolutional Vision Transformer with Bi-Level Uncertainty Estimation for Medical Image Segmentation. - Huimin Huang 002; Yawen Huang; Shiao Xie; Lanfen Lin; Ruofeng Tong 001; Yen-Wei Chen 001; Yuexiang Li; Yefeng Zheng 001 (ACM Multimedia, 2023)

IS2Net: Intra-domain Semantic and Inter-domain Style Enhancement for Semi-supervised Medical Domain Generalization. - Shiao Xie; Ziwei Niu; Huimin Huang 002; Hao Sun 013; Rui Qin; Yen-Wei Chen 001; Lanfen Lin (ACM Multimedia, 2023)

Combinatorial CNN-Transformer Learning with Manifold Constraints for Semi-supervised Medical Image Segmentation. - Huimin Huang 002; Yawen Huang; Shiao Xie; Lanfen Lin; Ruofeng Tong 001; Yen-Wei Chen 001; Yuexiang Li; Yefeng Zheng 001 (AAAI, 2024)

Going Beyond Multi-Task Dense Prediction with Synergy Embedding Models. - Huimin Huang 002; Yawen Huang; Lanfen Lin; Ruofeng Tong 001; Yen-Wei Chen 001; Hao Zheng 008; Yuexiang Li; Yefeng Zheng 001 (CVPR, 2024)

FPGA Oriented Lightweight Deep Learning Inference for Liver Cancer Segmentation. - Yingying Xu; Yinjie Wang; Qingqing Chen 001; Hongjie Hu; Huimin Huang 002; Lanfen Lin; Yen-Wei Chen 001; Jingsong Li 001; Hongxiang Lin (ISBI, 2024)

NightAdapter: Learning a Frequency Adapter for Generalizable Night-time Scene Segmentation. - Qi Bi; Jingjun Yi; Huimin Huang 002; Hao Zheng 008; Haolan Zhan; Yawen Huang; Yuexiang Li; Xian Wu 001; Yefeng Zheng 001 (CVPR, 2025)

Learning to Generalize Heterogeneous Representation for Cross-Modality Image Synthesis via Multiple Domain Interventions. - Yawen Huang; Huimin Huang 002; Hao Zheng 008; Yuexiang Li; Feng Zheng; Xiantong Zhen; Yefeng Zheng 001 (Int. J. Comput. Vis., 2025)