CIHLex: Complementary and Integrative Health Lexicon. - Huixue Zhou; Robin Austin; Halil Kilicoglu; Sheng-Chieh Lu; Rui Zhang 028 (AMIA, 2022)

Developing Natural Language Processing to Extract Complementary and Integrative Health Information from Electronic Health Record Data. - Huixue Zhou (ICHI, 2022)

Annotating Music Therapy, Chiropractic and Aquatic Exercise Using Electronic Health Record. - Huixue Zhou; Greg M. Silverman; Zhongran Niu; Jenzi Silverman; Rui Zhang 028; Roni Evans; Robin Austin (ICHI, 2022)

Repurposing Drugs for Alzheimer's Diseases through Link Prediction on Biomedical Literature. - Yongkang Xiao; Yu Hou; Huixue Zhou; Gayo Diallo; Marcelo Fiszman; Julian Wolfson; Halil Kilicoglu; You Chen 001; Hua Xu 001; William G. Mantyh; Rui Zhang 028 (ICHI, 2023)

W-procer: Weighted Prototypical Contrastive Learning for Medical Few-Shot Named Entity Recognition. - Mingchen Li; Yang Ye; Jeremy Yeung; Huixue Zhou; Huaiyuan Chu; Rui Zhang 028 (CoRR, 2023)

NoteChat: A Dataset of Synthetic Doctor-Patient Conversations Conditioned on Clinical Notes. - Junda Wang; Zonghai Yao; Zhichao Yang 001; Huixue Zhou; Rumeng Li; Xun Wang; Yucheng Xu; Hong Yu 001 (CoRR, 2023)

PeTailor: Improving Large Language Model by Tailored Chunk Scorer in Biomedical Triple Extraction. - Mingchen Li; Ming Chen; Huixue Zhou; Rui Zhang 028 (CoRR, 2023)

EHRTutor: Enhancing Patient Understanding of Discharge Instructions. - Zihao Zhang; Zonghai Yao; Huixue Zhou; Feiyun Ouyang; Hong Yu 001 (CoRR, 2023)

PaniniQA: Enhancing Patient Education Through Interactive Question Answering. - Pengshan Cai; Zonghai Yao; Fei Liu 004; Dakuo Wang; Meghan Reilly; Huixue Zhou; Lingxi Li; Yi Cao; Alok Kapoor; Adarsha Bajracharya; Dan Berlowitz; Hong Yu 001 (Trans. Assoc. Comput. Linguistics, 2023)

Extracting Complementary and Integrative Health Approaches in Electronic Health Records. - Huixue Zhou; Greg M. Silverman; Zhongran Niu; Jenzi Silverman; Roni Evans; Robin Austin; Rui Zhang 028 (J. Heal. Informatics Res., 2023)

NoteChat: A Dataset of Synthetic Patient-Physician Conversations Conditioned on Clinical Notes. - Junda Wang; Zonghai Yao; Zhichao Yang 001; Huixue Zhou; Rumeng Li; Xun Wang; Yucheng Xu; Hong Yu 001 (ACL (Findings), 2024)

Privacy-preserving Fine-tuning of Large Language Models through Flatness. - Tiejin Chen; Longchao Da; Huixue Zhou; Pingzhi Li; Kaixiong Zhou; Tianlong Chen 001; Hua Wei 001 (CoRR, 2024)

MedQA-CS: Benchmarking Large Language Models Clinical Skills Using an AI-SCE Framework. - Zonghai Yao; Zihao Zhang; Chaolong Tang; Xingyu Bian; Youxia Zhao; Zhichao Yang 001; Junda Wang; Huixue Zhou; Won Seok Jang; Feiyun Ouyang; Hong Yu 001 (CoRR, 2024)

RT: a Retrieving and Chain-of-Thought framework for few-shot medical named entity recognition. - Mingchen Li; Huixue Zhou; Han Yang; Rui Zhang 028 (J. Am. Medical Informatics Assoc., 2024)

A review of reinforcement learning for natural language processing and applications in healthcare. - Ying Liu; Haozhu Wang; Huixue Zhou; Mingchen Li; Yu Hou; Sicheng Zhou; Fang Wang; Rama Hoetzlein; Rui Zhang 028 (J. Am. Medical Informatics Assoc., 2024)

LEAP: LLM instruction-example adaptive prompting framework for biomedical relation extraction. - Huixue Zhou; Mingchen Li; Yongkang Xiao; Han Yang; Rui Zhang 028 (J. Am. Medical Informatics Assoc., 2024)

FuseLinker: Leveraging LLM's pre-trained text embeddings and domain knowledge to enhance GNN-based link prediction on biomedical knowledge graphs. - Yongkang Xiao; Sinian Zhang; Huixue Zhou; Mingchen Li; Han Yang; Rui Zhang 028 (J. Biomed. Informatics, 2024)

Complementary and Integrative Health Information in the literature: its lexicon and named entity recognition. - Huixue Zhou; Robin Austin; Sheng-Chieh Lu; Greg M. Silverman; Yuqi Zhou; Halil Kilicoglu; Hua Xu 001; Rui Zhang 028 (J. Am. Medical Informatics Assoc., 2024)

The Efficiency vs. Accuracy Trade-off: Optimizing RAG-Enhanced LLM Recommender Systems Using Multi-Head Early Exit. - Huixue Zhou; Hengrui Gu 002; Zaifu Zhan; Xi Liu; Kaixiong Zhou; Yongkang Xiao; Mingfu Liang; Srinivas Prasad Govindan; Piyush Chawla; Jiyan Yang; Xiangfei Meng; Huayu Li; et al. (ACL (1), 2025)

MCQG-SRefine: Multiple Choice Question Generation and Evaluation with Iterative Self-Critique, Correction, and Comparison Feedback. - Zonghai Yao; Aditya Parashar; Huixue Zhou; Won Seok Jang; Feiyun Ouyang; Zhichao Yang 001; Hong Yu 001 (NAACL (Long Papers), 2025)

Protecting Privacy against Membership Inference Attack with LLM Fine-tuning through Flatness. - Tiejin Chen; Longchao Da; Huixue Zhou; Pingzhi Li; Kaixiong Zhou; Tianlong Chen 001; Hua Wei 001 (SDM, 2025)

The Efficiency vs. Accuracy Trade-off: Optimizing RAG-Enhanced LLM Recommender Systems Using Multi-Head Early Exit. - Huixue Zhou; Hengrui Gu 002; Xi Liu; Kaixiong Zhou; Mingfu Liang; Yongkang Xiao; Srinivas Govindan; Piyush Chawla; Jiyan Yang; Xiangfei Meng; Huayu Li; Buyun Zhang; et al. (CoRR, 2025)

An evaluation of DeepSeek Models in Biomedical Natural Language Processing. - Zaifu Zhan; Shuang Zhou 012; Huixue Zhou; Jiawen Deng; Yu Hou; Jeremy Yeung; Rui Zhang 028 (CoRR, 2025)

EPEE: Towards Efficient and Effective Foundation Models in Biomedicine. - Zaifu Zhan; Shuang Zhou 012; Huixue Zhou; Zirui Liu 001; Rui Zhang 028 (CoRR, 2025)

DrKGC: Dynamic Subgraph Retrieval-Augmented LLMs for Knowledge Graph Completion across General and Biomedical Domains. - Yongkang Xiao; Sinian Zhang; Yi Dai; Huixue Zhou; Jue Hou; Jie Ding; Rui Zhang (CoRR, 2025)