Fast detection of high-order epistatic interactions in genome-wide association studies using information theoretic measure. - Sangseob Leem; Hyun-hwan Jeong; Jungseob Lee; Kyubum Wee; Kyung-Ah Sohn (Comput. Biol. Chem., 2014)

Constructing and Exploiting Software Metrics Networks for Software Quality Assessment. - Sungdo Gu; So Yeon Kim; Hyun-hwan Jeong; Kyung-Ah Sohn (ICITCS, 2015)

A Network Clustering Based Software Attribute Selection for Identifying Fault-Prone Modules. - So Yeon Kim; Sungdo Gu; Hyun-hwan Jeong; Kyung-Ah Sohn (ICITCS, 2015)

hiHMM: Bayesian non-parametric joint inference of chromatin state maps. - Kyung-Ah Sohn; Joshua Wing Kei Ho; Djordje Djordjevic; Hyun-hwan Jeong; Peter J. Park; Ju Han Kim (Bioinform., 2015)

Investigating the utility of clinical outcome-guided mutual information network in network-based Cox regression. - Hyun-hwan Jeong; So Kim; Kyubum Wee; Kyung-Ah Sohn (BMC Syst. Biol., 2015)

CRISPRcloud: a secure cloud-based pipeline for CRISPR pooled screen deconvolution. - Hyun-hwan Jeong; Seon Young Kim; Maxime W. C. Rousseaux; Huda Y. Zoghbi; Zhandong Liu (Bioinform., 2017)

Decoding TDP-43 Dependent Cryptic Splicing in Amyotrophic Lateral Sclerosis and Identifying Novel Disease-causing Genes. - Hari Krishna Yalamanchili; Hyun-Hwan Jeong; Zhandong Liu (BCB, 2018)

An ultra-fast and scalable quantification pipeline for transposable elements from next generation sequencing data. - Hyun-Hwan Jeong; Hari Krishna Yalamanchili; Caiwei Guo; Joshua M. Shulman; Zhandong Liu (PSB, 2018)

Beta-Binomial Modeling of CRISPR Pooled Screen Data Identifies Target Genes with Greater Sensitivity and fewer False Negatives. - Hyun-Hwan Jeong; Seon Young Kim; Maxime W. C. Rousseaux; Huda Y. Zoghbi; Zhandong Liu (BCB, 2019)

Deep learning for detecting and elucidating human T-cell leukemia virus type 1 integration in the human genome. - Hao-Dong Xu; Johnathan Jia; Hyun-Hwan Jeong; Zhongming Zhao (Patterns, 2023)

ConSol: Sequential Probability Ratio Testing to Find Consistent LLM Reasoning Paths Efficiently. - Jaeyeon Lee; Guantong Qi; Matthew Neeley; Zhandong Liu; Hyun-Hwan Jeong (CoRR, 2025)