Structure-Based Design and Analysis of Cytochrome P450 Inhibitors for the Treatment of Prostate Cancer. - Muhittin Emre Özdemir; I. Halil Kavakli; Metin Türkay (BIOCOMP, 2006)

Structure Prediction of Potato Large Subunit ADP - Glucose Pyrophosphorylase. - Aytug Tuncel; I. Halil Kavakli; Ozlem Keskin (BIOCOMP, 2006)

Classification of drug molecules considering their IC50 values using mixed-integer linear programming based hyper-boxes method. - Pelin Armutlu; Muhittin Emre Özdemir; Fadime Üney Yüksektepe; I. Halil Kavakli; Metin Türkay (BMC Bioinform., 2008)

Classification of Activities and Binding Free Energies of Human Cytochrome P450 2D6 Inhibitors Using the Hyper-box Approach. - Onur Dagliyan; I. Halil Kavakli; Metin Türkay (BIOCOMP, 2009)

Classification of Cytochrome P450 Inhibitors with Respect to Binding Free Energy and pIC50 Using Common Molecular Descriptors. - Onur Dagliyan; I. Halil Kavakli; Metin Türkay (J. Chem. Inf. Model., 2009)

Investigation of the Interaction between the Large and Small Subunits of Potato ADP-Glucose Pyrophosphorylase. - Ibrahim Baris; Aytug Tuncel; Natali Ozber; Ozlem Keskin; I. Halil Kavakli (PLoS Comput. Biol., 2009)

Milp-hyperbox classification for structure-based drug design in the discovery of small molecule inhibitors of SIRTUIN6. - Mehmet Tardu; Fatih Rahim; I. Halil Kavakli; Metin Türkay (RAIRO Oper. Res., 2016)