Using Dirichlet Mixture Priors to Derive Hidden Markov Models for Protein Families. - Michael Brown; Richard Hughey; Anders Krogh; I. Saira Mian; Kimmen Sjölander; David Haussler (ISMB, 1993)

Recent Methods for RNA Modeling Using Stochastic Context-Free Grammars. - Yasubumi Sakakibara; Michael Brown; Richard Hughey; I. Saira Mian; Kimmen Sjölander; Rebecca C. Underwood; David Haussler (CPM, 1994)

Stochastic Context-Free Grammars for Modeling RN. - Yasubumi Sakakibara; Michael Brown; Rebecca C. Underwood; I. Saira Mian; David Haussler (HICSS (5), 1994)

RNA Modeling Using Gibbs Sampling and Stochastic Context Free Grammars. - Leslie Grate; Mark Herbster; Richard Hughey; David Haussler; I. Saira Mian; Harry Noller (ISMB, 1994)

Dirichlet mixtures: a method for improved detection of weak but significant protein sequence homology. - Kimmen Sjölander; Kevin Karplus; Michael Brown; Richard Hughey; Anders Krogh; I. Saira Mian; David Haussler (Comput. Appl. Biosci., 1996)

Statistic Modeling, Phylogenetic Analysis and Strjucture Prediction of a Protein Splicing Domain Common to Infeins and Hedgehog Proteins. - J. Z. Dalgaard; M. J. Moser; Richard Hughey; I. Saira Mian (J. Comput. Biol., 1997)

Statistical Modelling and phylogenetic Analysis of a Deaminase Domain. - I. Saira Mian; M. J. Moser; W. R. Holley; A. Chatterjee (J. Comput. Biol., 1998)

Representing and Reasoning about Protein Families Using Generative and Discriminative Methods. - I. Saira Mian; Inna Dubchak (J. Comput. Biol., 2000)

Simultaneous Relevant Feature Identification and Classification in High-Dimensional Spaces. - L. R. Grate; Chiranjib Bhattacharyya; Michael I. Jordan; I. Saira Mian (WABI, 2002)

Simultaneous classification and relevant feature identification in high-dimensional spaces: application to molecular profiling data. - Chiranjib Bhattacharyya; L. R. Grate; A. Rizki; D. Radisky; F. J. Molina; Michael I. Jordan; Mina J. Bissell; I. Saira Mian (Signal Process., 2003)

Robust Sparse Hyperplane Classifiers: Application to Uncertain Molecular Profiling Data. - Chiranjib Bhattacharyya; L. R. Grate; Michael I. Jordan; Laurent El Ghaoui; I. Saira Mian (J. Comput. Biol., 2004)

Evaluation of normalization methods for cDNA microarray data by k-NN classification. - Wei Wu 023; Eric P. Xing; Connie Myers; I. Saira Mian; Mina J. Bissell (BMC Bioinform., 2005)

Statistical modeling of biomedical corpora: mining the Caenorhabditis Genetic Center Bibliography for genes related to life span. - David M. Blei; K. Franks; Michael I. Jordan; I. Saira Mian (BMC Bioinform., 2006)

Taking U out, with two nucleases? - I. Saira Mian; Elizabeth A. Worthey; Reza Salavati (BMC Bioinform., 2006)

Ensemble attribute profile clustering: discovering and characterizing groups of genes with similar patterns of biological features. - J. R. Semeiks; A. Rizki; Mina J. Bissell; I. Saira Mian (BMC Bioinform., 2006)

MPHASYS: a mouse phenotype analysis system. - R. Brent Calder; Rudolf B. Beems; Harry van Steeg; I. Saira Mian; Paul H. M. Lohman; Jan Vijg (BMC Bioinform., 2007)

A linear programming approach for estimating the structure of a sparse linear genetic network from transcript profiling data. - Sahely Bhadra; Chiranjib Bhattacharyya; Nagasuma R. Chandra; I. Saira Mian (Algorithms Mol. Biol., 2009)

An additive exponential noise channel with a transmission deadline. - Yi-Lin Tsai; Christopher Rose; Ruochen Song; I. Saira Mian (ISIT, 2011)

Wireless signaling with identical quanta. - Ruochen Song; Christopher Rose; Yi-Lin Tsai; I. Saira Mian (WCNC, 2012)

Timing Channels with Multiple Identical Quanta - Christopher Rose; I. Saira Mian; Ruochen Song (CoRR, 2012)

Signaling with identical tokens: Lower bounds with energy constraints. - Christopher Rose; I. Saira Mian (ISIT, 2013)

Signaling with identical tokens: Upper bounds with energy constraints. - Christopher Rose; I. Saira Mian (ISIT, 2014)

A fundamental framework for molecular communication channels: Timing & payload. - Christopher Rose; I. Saira Mian (ICC, 2015)

Inscribed Matter Communication: Part I. - Christopher Rose; I. Saira Mian (IEEE Trans. Mol. Biol. Multi Scale Commun., 2016)

Inscribed Matter Communication: Part II. - Christopher Rose; I. Saira Mian (IEEE Trans. Mol. Biol. Multi Scale Commun., 2016)

A General Upper Bound on Point-to-Point Particle Timing Channel Capacity Under Constant Particle Emission Intensity. - Christopher Rose; I. Saira Mian (ISIT, 2019)

Capacity Bounds on Point-to-Point Communication Using Molecules. - Christopher Rose; Ismat Saira Mian; Mustafa Ozmen (Proc. IEEE, 2019)