A regression model for estimating DNA copy number applied to capture sequencing data. - Guillem Rigaill; Sidney Cadot; Roelof J. C. Kluin; Zheng Xue; René Bernards; Ian J. Majewski; Lodewyk F. A. Wessels (Bioinform., 2012)

Finding a suitable library size to call variants in RNA-Seq. - Anna Quaglieri; Christoffer Flensburg; Terence P. Speed; Ian J. Majewski (BMC Bioinform., 2020)

SuperFreq: Integrated mutation detection and clonal tracking in cancer. - Christoffer Flensburg; Tobias Sargeant; Alicia Oshlack; Ian J. Majewski (PLoS Comput. Biol., 2020)

Detecting copy number alterations in RNA-Seq using SuperFreq. - Christoffer Flensburg; Alicia Oshlack; Ian J. Majewski (Bioinform., 2021)