ParCrys: a Parzen window density estimation approach to protein crystallization propensity prediction. - Ian M. Overton; Gianandrea Padovani; Mark A. Girolami; Geoffrey J. Barton (Bioinform., 2008)

TarO: a target optimisation system for structural biology. - Ian M. Overton; C. A. Johannes van Niekerk; Lester G. Carter; Alice Dawson; David M. A. Martin; Scott Cameron; Stephen A. McMahon; Malcolm F. White; William N. Hunter; James H. Naismith; Geoffrey J. Barton (Nucleic Acids Res., 2008)

Global network analysis of drug tolerance, mode of action and virulence in methicillin-resistant S. aureus. - Ian M. Overton; Shirley Graham; Katherine A. Gould; Jason Hinds; Catherine H. Botting; Sally Shirran; Geoffrey J. Barton; Peter J. Coote (BMC Syst. Biol., 2011)

TMA Navigator: network inference, patient stratification and survival analysis with tissue microarray data. - Alexander L. R. Lubbock; Elad Katz; David J. Harrison; Ian M. Overton (Nucleic Acids Res., 2013)

SynLeGG: analysis and visualization of multiomics data for discovery of cancer 'Achilles Heels' and gene function relationships. - Mark Wappett; Adam Harris; Alexander L. R. Lubbock; Ian Lobb; Simon S. McDade; Ian M. Overton (Nucleic Acids Res., 2021)

RadSigBench: a framework for benchmarking functional genomics signatures of cancer cell radiosensitivity. - John D. O'Connor; Ian M. Overton; Stephen J. McMahon (Briefings Bioinform., 2022)

QClique: Optimizing Performance and Accuracy in Maximum Weighted Clique. - Qasim Abbas; Mohsen Koohi Esfahani; Ian M. Overton; Hans Vandierendonck (Euro-Par (3), 2024)

ieGENES: A machine learning method for selecting differentially expressed genes in cancer studies. - Xiao-Lei Xia; Shang-Ming Zhou; Yunguang Liu; Na Lin; Ian M. Overton (J. Biomed. Informatics, 2025)