MIDAS: software for analysis and visualisation of interallelic disequilibrium between multiallelic markers. - Tom R. Gaunt; Santiago Rodríguez; Carlos Zapata; Ian N. M. Day (BMC Bioinform., 2006)

Cubic exact solutions for the estimation of pairwise haplotype frequencies: implications for linkage disequilibrium analyses and a web tool 'CubeX'. - Tom R. Gaunt; Santiago Rodríguez; Ian N. M. Day (BMC Bioinform., 2007)

Predicting the functional consequences of cancer-associated amino acid substitutions. - Hashem A. Shihab; Julian Gough; David N. Cooper; Ian N. M. Day; Tom R. Gaunt (Bioinform., 2013)

A Random Forest proximity matrix as a new measure for gene annotation. - José A. Seoane; Ian N. M. Day; Juan P. Casas; Colin Campbell; Tom R. Gaunt (ESANN, 2014)

Using a Random Forest proximity measure for variable importance stratification in genotypic data. - José A. Seoane; Ian N. M. Day; Colin Campbell; Juan P. Casas; Tom R. Gaunt (IWBBIO, 2014)

A pathway-based data integration framework for prediction of disease progression. - José A. Seoane; Ian N. M. Day; Tom R. Gaunt; Colin Campbell (Bioinform., 2014)

Canonical Correlation Analysis for Gene-Based Pleiotropy Discovery. - José A. Seoane; Colin Campbell; Ian N. M. Day; Juan P. Casas; Tom R. Gaunt (PLoS Comput. Biol., 2014)

An integrative approach to predicting the functional effects of non-coding and coding sequence variation. - Hashem A. Shihab; Mark F. Rogers; Julian Gough; Matthew E. Mort; David N. Cooper; Ian N. M. Day; Tom R. Gaunt; Colin Campbell (Bioinform., 2015)

HAPRAP: a haplotype-based iterative method for statistical fine mapping using GWAS summary statistics. - Jie Zheng 006; Santiago Rodríguez; Charles Laurin; Denis Baird; Lea Trela-Larsen; Mesut A. Erzurumluoglu; Yi Zheng; Jon White; Claudia Giambartolomei; Delilah Zabaneh; Richard Morris; Meena Kumari; et al. (Bioinform., 2017)